RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ATP2C2O75185 946 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 SLC1A1P43005 524 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 CLEC4CQ8WTT0 213 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 RUBCNQ92622 972 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 FAXDC2Q96IV6 333 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 PCYOX1Q9UHG3 505 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 NME7Q9Y5B8 376 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 A8MXQ7 604 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 SNX17Q15036 470 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 DENND2CQ68D51 928 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 SLC27A1Q6PCB7 646 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-221ENST00000477203 SAPCD2Q86UD0 394 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 ARFGAP1Q8N6T3 406 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 CXorf38Q8TB03 319 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 CFAP57Q96MR6 1250 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
HDAC7-221ENST00000477203 TBK1Q9UHD2 729 aa14.09□□□□□ -0.15
HDAC7-221ENST00000477203 BANF1O75531 89 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 F2P00734 622 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 LCP1P13796 627 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 ATF2P15336 505 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 TCEAL1Q15170 157 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 KYNUQ16719 465 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 LONRF1Q17RB8 773 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 MORN1Q5T089 497 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 RGMBQ6NW40 437 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 NOTUMQ6P988 496 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 ARRDC4Q8NCT1 418 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 EMID1Q96A84 441 aaPredicted RBP14.08□□□□□ -0.15
HDAC7-221ENST00000477203 ATP6V1G3Q96LB4 118 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 BCO2Q9BYV7 579 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 ASB7Q9H672 318 aa14.08□□□□□ -0.15
HDAC7-221ENST00000477203 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.08□□□□□ -0.15
HDAC7-221ENST00000477203 H0YGN5 161 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SGK1O00141 431 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 MED7O43513 233 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 LRCH4O75427 683 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 DARSP14868 501 aaKnown RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 HSPA6P17066 643 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 ATXN1P54253 815 aaKnown RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 FKBP1BP68106 108 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 PMF1Q6P1K2 205 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 XYLT1Q86Y38 959 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 IFNL1Q8IU54 200 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SELENOSQ9BQE4 189 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 NT5C1AQ9BXI3 368 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 MLXIPLQ9NP71 852 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SLC45A1Q9Y2W3 748 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 NFS1Q9Y697 457 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 NRCAMQ92823 1304 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SPTLC1O15269 473 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 CST8O60676 142 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 P4HA1P13674 534 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 ELNP15502 786 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 ENPEPQ07075 957 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 FAM187BQ17R55 369 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 P3H1Q32P28 736 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 SPOCD1Q6ZMY3 1216 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 ZC3H18Q86VM9 953 aaKnown RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 C3orf20Q8ND61 904 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 WNT8BQ93098 351 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 CTNNAL1Q9UBT7 734 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 ANAPC5Q9UJX4 755 aa14.08□□□□□ -0.16
HDAC7-221ENST00000477203 BARX2Q9UMQ3 279 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-221ENST00000477203 F5H423 210 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 PODXLO00592 558 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 GAS8O95995 478 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 PDGFRAP16234 1089 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 TFE3P19532 575 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 CCNHP51946 323 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 NPNTQ6UXI9 565 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 FAM183BPQ6ZVS7 135 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 KCTD6Q8NC69 237 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 TRPV1Q8NER1 839 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 NFKBIZQ9BYH8 718 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 I3L4J1 428 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 MIPP30301 263 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 GCKP35557 465 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 GPD2P43304 727 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 PPP6R3Q5H9R7 873 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 MREGQ8N565 214 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 MSL3Q8N5Y2 521 aaKnown RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 HASPINQ8TF76 798 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 LRRC19Q9H756 370 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 TMBIM4Q9HC24 238 aa14.07□□□□□ -0.16
HDAC7-221ENST00000477203 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
HDAC7-221ENST00000477203 SMIM28A0A1B0GU29 152 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 CLDN5O00501 218 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 PSTPIP1O43586 416 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 LSM8O95777 96 aaKnown RBP14.06□□□□□ -0.16
HDAC7-221ENST00000477203 GRM5P41594 1212 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 GAD2Q05329 585 aa14.06□□□□□ -0.16
HDAC7-221ENST00000477203 GPS1Q13098 491 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms