RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ELOVL4Q9GZR5 314 aa22.1■■□□□ 1.13
LIMS2-214ENST00000476932 PSMC3IPQ9P2W1 217 aaPredicted RBP22.1■■□□□ 1.13
LIMS2-214ENST00000476932 ZMYND8Q9ULU4 1186 aaPredicted RBP22.1■■□□□ 1.13
LIMS2-214ENST00000476932 SMG5Q9UPR3 1016 aaKnown RBP22.1■■□□□ 1.13
LIMS2-214ENST00000476932 TNFSF13BQ9Y275 285 aa22.1■■□□□ 1.13
LIMS2-214ENST00000476932 GPR25O00155 361 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 IGF2BP3O00425 579 aaKnown RBP eCLIP22.09■■□□□ 1.13
LIMS2-214ENST00000476932 NOP56O00567 594 aaKnown RBP22.09■■□□□ 1.13
LIMS2-214ENST00000476932 DNAJC3Q13217 504 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 ZNF268Q14587 947 aaPredicted RBP22.09■■□□□ 1.13
LIMS2-214ENST00000476932 SLC1A5Q15758 541 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 ASRGL1Q7L266 308 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 EXOC8Q8IYI6 725 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 PPCSQ9HAB8 311 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 KLHL14Q9P2G3 628 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 TCRBV7S3A2A0A539 114 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 E7ESA3 106 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 TMEM63AO94886 807 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 SPARCL1Q14515 664 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 PCGF5Q86SE9 256 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 TTC13Q8NBP0 860 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 COPS5Q92905 334 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 MRRFQ96E11 262 aaKnown RBP22.09■■□□□ 1.13
LIMS2-214ENST00000476932 SMC6Q96SB8 1091 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 DHRS4Q9BTZ2 278 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 MAK16Q9BXY0 300 aaKnown RBP22.09■■□□□ 1.13
LIMS2-214ENST00000476932 ADAM33Q9BZ11 813 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 STARD13Q9Y3M8 1113 aa22.09■■□□□ 1.13
LIMS2-214ENST00000476932 IL18RAPO95256 599 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 SSTR1P30872 391 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 PTPN11Q06124 597 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-214ENST00000476932 CCDC15Q0P6D6 951 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 MYO1EQ12965 1108 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 MOGSQ13724 837 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 TFDP1Q14186 410 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 PDK4Q16654 411 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 HADHQ16836 314 aaKnown RBP22.08■■□□□ 1.13
LIMS2-214ENST00000476932 CCDC62Q6P9F0 684 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 PNMA8AQ86V59 439 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-214ENST00000476932 UNC45BQ8IWX7 931 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 CMASQ8NFW8 434 aaPredicted RBP22.08■■□□□ 1.13
LIMS2-214ENST00000476932 SPATA33Q96N06 139 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 RPF1Q9H9Y2 349 aaKnown RBP22.08■■□□□ 1.13
LIMS2-214ENST00000476932 SLCO1B3Q9NPD5 702 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 WDR35Q9P2L0 1181 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 FETUBQ9UGM5 382 aa22.08■■□□□ 1.13
LIMS2-214ENST00000476932 CILPO75339 1184 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 MICAL2O94851 1124 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 MIPP30301 263 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 RDXP35241 583 aaKnown RBP22.08■■□□□ 1.12
LIMS2-214ENST00000476932 FBXO16Q8IX29 292 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-214ENST00000476932 MCRS1Q96EZ8 462 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 ASCC2Q9H1I8 757 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-214ENST00000476932 TXNRD2Q9NNW7 524 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 ARHGEF3Q9NR81 526 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 PCSK1NQ9UHG2 260 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 BAIAP2L1Q9UHR4 511 aa22.08■■□□□ 1.12
LIMS2-214ENST00000476932 LACTBL1A8MY62 500 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 FGFR1P11362 822 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 CCNB1P14635 433 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 GABRB2P47870 512 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 GEMIN4P57678 1058 aaKnown RBP22.07■■□□□ 1.12
LIMS2-214ENST00000476932 EFCAB12Q6NXP0 572 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 KIF2BQ8N4N8 673 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 MZB1Q8WU39 189 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 PEBP4Q96S96 227 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 PHTF1Q9UMS5 762 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.07■■□□□ 1.12
LIMS2-214ENST00000476932 TRIM33Q9UPN9 1127 aa22.07■■□□□ 1.12
LIMS2-214ENST00000476932 A0A0G2JLL6 359 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 IRF6O14896 467 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 ITGB3P05106 788 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 ALADP13716 330 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 CA4P22748 312 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 ARL4CP56559 192 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 IRX3P78415 501 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 JADE1Q6IE81 842 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 CYP4V2Q6ZWL3 525 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 CCDC91Q7Z6B0 441 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 PRRT2Q7Z6L0 340 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 ATP11CQ8NB49 1132 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 PLXNA1Q9UIW2 1896 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 DNAJC25-GNG10A0A024R161 153 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 APOC4-APOC2K7ER74 178 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 HGSO14964 777 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 PIAS1O75925 651 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 APOC2P02655 101 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 KRT16P08779 473 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 TMEM132AQ24JP5 1023 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 CEP57Q86XR8 500 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 TAB3Q8N5C8 712 aaPredicted RBP22.06■■□□□ 1.12
LIMS2-214ENST00000476932 PYROXD1Q8WU10 500 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 KLHL29Q96CT2 875 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 FAXDC2Q96IV6 333 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 ACSS3Q9H6R3 686 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 IFT122Q9HBG6 1241 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 CITO14578 2027 aa22.06■■□□□ 1.12
LIMS2-214ENST00000476932 EDF1O60869 148 aaKnown RBP22.05■■□□□ 1.12
LIMS2-214ENST00000476932 C22orf31O95567 290 aa22.05■■□□□ 1.12
LIMS2-214ENST00000476932 TRUB2O95900 331 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms