RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 SLC20A1Q8WUM9 679 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 MRPL9Q9BYD2 267 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 FOXP1Q9H334 677 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 TK2O00142 265 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 SLC25A12O75746 678 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 FARP2O94887 1054 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 CASP14P31944 242 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 AP3M2P53677 418 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 PLGLB1Q02325 96 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 NCOA4Q13772 614 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 SLC44A4Q53GD3 710 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 HIBCHQ6NVY1 386 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 CCDC149Q6ZUS6 474 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 CDK20Q8IZL9 346 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ATP6V1C2Q8NEY4 427 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ZNF564Q8TBZ8 553 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 RERGQ96A58 199 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 USP28Q96RU2 1077 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ELAC2Q9BQ52 826 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 DMTF1Q9Y222 760 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ABCE1P61221 599 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 CCDC92Q53HC0 331 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 SCARA3Q6AZY7 606 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 OTOAQ7RTW8 1153 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 CLPBQ9H078 707 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 UXTQ9UBK9 157 aaPredicted RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 RRP9O43818 475 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 GAS2O43903 313 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 FGRP09769 529 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 PMS2P54278 862 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 KLC1Q07866 573 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ELAVL2Q12926 359 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 TMED1Q13445 227 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 TLK2Q86UE8 772 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 GUF1Q8N442 669 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 CDCA5Q96FF9 252 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 FAM20AQ96MK3 541 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 KCNN2Q9H2S1 579 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 IARS2Q9NSE4 1012 aaKnown RBP6.95□□□□□ -1.3
TTC3-215ENST00000476784 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 STOML1Q9UBI4 398 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 ZFYVE16Q7Z3T8 1539 aa6.95□□□□□ -1.3
TTC3-215ENST00000476784 EMSYQ7Z589 1322 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 NOS2P35228 1153 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 CLCN3P51790 818 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 GPC5P78333 572 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 FSCN1Q16658 493 aaKnown RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 OR2W6PQ8NHA6 318 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TASP1Q9H6P5 420 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PRMT7Q9NVM4 692 aaPredicted RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 CHL1O00533 1208 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 EIF3DO15371 548 aaKnown RBP eCLIP6.94□□□□□ -1.39e-7■□□□□ 10.5
TTC3-215ENST00000476784 IL18RAPO95256 599 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PTPN9P43378 593 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 ACADSBP45954 432 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 GFPT1Q06210 699 aaPredicted RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 PDIA2Q13087 525 aaKnown RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 ATAD3BQ5T9A4 648 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PRR5LQ6MZQ0 368 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PTAR1Q7Z6K3 402 aaPredicted RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 CCDC33Q8N5R6 958 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TTLL11Q8NHH1 800 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PIGKQ92643 395 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 MTMR8Q96EF0 704 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PI4K2AQ9BTU6 479 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 MROH8Q9H579 483 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 RNF112Q9ULX5 631 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 OR10H1Q9Y4A9 318 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 ANKARQ7Z5J8 1434 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 ADGRL3Q9HAR2 1447 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PGK1P00558 417 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 STXBP1P61764 594 aaKnown RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 ELF2Q15723 593 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 SLFNL1Q499Z3 407 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PRAMEF19Q5SWL8 479 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PSRC1Q6PGN9 363 aaPredicted RBP6.94□□□□□ -1.3
TTC3-215ENST00000476784 CLEC10AQ8IUN9 316 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 ANKMY2Q8IV38 441 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 CLEC4FQ8N1N0 589 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 CD99L2Q8TCZ2 262 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 CPA5Q8WXQ8 436 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 MED4Q9NPJ6 270 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TRBV23OR9-2A0A075B6M9 112 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TMEM265A0A087WTH1 108 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TRIM49P0CI25 452 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TRIM49CP0CI26 452 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 FGFR4P22455 802 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 PNPLA4P41247 253 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 CASP9P55211 416 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 MDH1BQ5I0G3 518 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 ADGRF2Q8IZF7 708 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 METTL21AQ8WXB1 218 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 TMEM159Q96B96 161 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 LRRC46Q96FV0 321 aa6.94□□□□□ -1.3
TTC3-215ENST00000476784 MLPHQ9BV36 600 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms