RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 VAV1P15498 845 aa8.79□□□□□ -1
VAPB-205ENST00000476395 GCNT1Q02742 428 aa8.79□□□□□ -1
VAPB-205ENST00000476395 AP1B1Q10567 949 aa8.79□□□□□ -1
VAPB-205ENST00000476395 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
VAPB-205ENST00000476395 TDRD10Q5VZ19 366 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 LMBRD2Q68DH5 695 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 DPY19L2Q6NUT2 758 aa8.79□□□□□ -1
VAPB-205ENST00000476395 FBXL13Q8NEE6 735 aa8.79□□□□□ -1
VAPB-205ENST00000476395 NAT14Q8WUY8 206 aa8.79□□□□□ -1
VAPB-205ENST00000476395 NCSTNQ92542 709 aa8.79□□□□□ -1
VAPB-205ENST00000476395 HAPLN3Q96S86 360 aa8.79□□□□□ -1
VAPB-205ENST00000476395 STMN4Q9H169 189 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 TUT1Q9H6E5 874 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 LARSQ9P2J5 1176 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 ZNF70Q9UC06 446 aaPredicted RBP8.79□□□□□ -1
VAPB-205ENST00000476395 CNTN6Q9UQ52 1028 aa8.79□□□□□ -1
VAPB-205ENST00000476395 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.79□□□□□ -1
VAPB-205ENST00000476395 TYROBPO43914 113 aa8.78□□□□□ -1
VAPB-205ENST00000476395 HNRNPCP07910 306 aaKnown RBP eCLIP8.78□□□□□ -1
VAPB-205ENST00000476395 MFAP3P55082 362 aa8.78□□□□□ -1
VAPB-205ENST00000476395 STRN3Q13033 797 aa8.78□□□□□ -1
VAPB-205ENST00000476395 ALCAMQ13740 583 aa8.78□□□□□ -1
VAPB-205ENST00000476395 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 ARHGEF18Q6ZSZ5 1173 aa8.78□□□□□ -1
VAPB-205ENST00000476395 TRABD2AQ86V40 505 aa8.78□□□□□ -1
VAPB-205ENST00000476395 PDCD7Q8N8D1 485 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 TMC2Q8TDI7 906 aa8.78□□□□□ -1
VAPB-205ENST00000476395 ZBED3Q96IU2 234 aaPredicted RBP8.78□□□□□ -1
VAPB-205ENST00000476395 NACA2Q9H009 215 aa8.78□□□□□ -1
VAPB-205ENST00000476395 TAS2R1Q9NYW7 299 aa8.78□□□□□ -1
VAPB-205ENST00000476395 MRPL11Q9Y3B7 192 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 WDR90Q96KV7 1748 aa8.78□□□□□ -1
VAPB-205ENST00000476395 GOLGA8RI6L899 631 aa8.78□□□□□ -1
VAPB-205ENST00000476395 GYG2O15488 501 aa8.78□□□□□ -1
VAPB-205ENST00000476395 EDF1O60869 148 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 BANF1O75531 89 aa8.78□□□□□ -1
VAPB-205ENST00000476395 GPX6P59796 221 aa8.78□□□□□ -1
VAPB-205ENST00000476395 SNRPFP62306 86 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 NOMO3P69849 1222 aa8.78□□□□□ -1
VAPB-205ENST00000476395 STXBP4Q6ZWJ1 553 aa8.78□□□□□ -1
VAPB-205ENST00000476395 ERLEC1Q96DZ1 483 aa8.78□□□□□ -1
VAPB-205ENST00000476395 SLX1AQ9BQ83 275 aa8.78□□□□□ -1
VAPB-205ENST00000476395 UBAP1Q9NZ09 502 aa8.78□□□□□ -1
VAPB-205ENST00000476395 KLF15Q9UIH9 416 aa8.78□□□□□ -1
VAPB-205ENST00000476395 FAM47DPA6NHR8 397 aa8.78□□□□□ -1
VAPB-205ENST00000476395 PROSCO94903 275 aa8.78□□□□□ -1
VAPB-205ENST00000476395 CDK7P50613 346 aa8.78□□□□□ -1
VAPB-205ENST00000476395 RPL7AP62424 266 aaKnown RBP8.78□□□□□ -1
VAPB-205ENST00000476395 CDC16Q13042 620 aa8.78□□□□□ -1
VAPB-205ENST00000476395 PLEKHA7Q6IQ23 1121 aa8.78□□□□□ -1
VAPB-205ENST00000476395 ARFGAP1Q8N6T3 406 aa8.78□□□□□ -1
VAPB-205ENST00000476395 FAM161BQ96MY7 647 aa8.78□□□□□ -1
VAPB-205ENST00000476395 RUNDC3BQ96NL0 473 aa8.78□□□□□ -1
VAPB-205ENST00000476395 VCX3BQ9H321 246 aa8.78□□□□□ -1
VAPB-205ENST00000476395 KIAA1586Q9HCI6 787 aa8.78□□□□□ -1
VAPB-205ENST00000476395 VCX3AQ9NNX9 186 aa8.78□□□□□ -1
VAPB-205ENST00000476395 INIPQ9NRY2 104 aa8.78□□□□□ -1
VAPB-205ENST00000476395 PDP2Q9P2J9 529 aa8.78□□□□□ -1
VAPB-205ENST00000476395 HEY2Q9UBP5 337 aa8.78□□□□□ -1
VAPB-205ENST00000476395 STARD13Q9Y3M8 1113 aa8.78□□□□□ -1
VAPB-205ENST00000476395 RIPK3Q9Y572 518 aa8.78□□□□□ -1
VAPB-205ENST00000476395 TTLL13PA6NNM8 815 aa8.77□□□□□ -1
VAPB-205ENST00000476395 FAM189A1O60320 539 aa8.77□□□□□ -1
VAPB-205ENST00000476395 TBC1D12O60347 775 aa8.77□□□□□ -1
VAPB-205ENST00000476395 PCSK6P29122 969 aa8.77□□□□□ -1
VAPB-205ENST00000476395 IL9RQ01113 521 aa8.77□□□□□ -1
VAPB-205ENST00000476395 BTKQ06187 659 aa8.77□□□□□ -1
VAPB-205ENST00000476395 CALCOCO2Q13137 446 aa8.77□□□□□ -1
VAPB-205ENST00000476395 CBX3Q13185 183 aa8.77□□□□□ -1
VAPB-205ENST00000476395 MSS51Q4VC12 460 aa8.77□□□□□ -1
VAPB-205ENST00000476395 LPCAT4Q643R3 524 aa8.77□□□□□ -1
VAPB-205ENST00000476395 RGS9BPQ6ZS82 235 aa8.77□□□□□ -1
VAPB-205ENST00000476395 ZNF365Q70YC5 407 aa8.77□□□□□ -1
VAPB-205ENST00000476395 MARK2Q7KZI7 788 aaKnown RBP8.77□□□□□ -1
VAPB-205ENST00000476395 SDCCAG8Q86SQ7 713 aaPredicted RBP8.77□□□□□ -1
VAPB-205ENST00000476395 KATNAL2Q8IYT4 538 aa8.77□□□□□ -1
VAPB-205ENST00000476395 ZCCHC9Q8N567 271 aaKnown RBP8.77□□□□□ -1
VAPB-205ENST00000476395 SAMD3Q8N6K7 520 aa8.77□□□□□ -1
VAPB-205ENST00000476395 FAM151AQ8WW52 585 aa8.77□□□□□ -1
VAPB-205ENST00000476395 USP6NLQ92738 828 aa8.77□□□□□ -1
VAPB-205ENST00000476395 MCUR1Q96AQ8 359 aa8.77□□□□□ -1
VAPB-205ENST00000476395 DTNBP1Q96EV8 351 aa8.77□□□□□ -1
VAPB-205ENST00000476395 HSPBAP1Q96EW2 488 aa8.77□□□□□ -1
VAPB-205ENST00000476395 CLMNQ96JQ2 1002 aa8.77□□□□□ -1
VAPB-205ENST00000476395 KLHL11Q9NVR0 708 aa8.77□□□□□ -1
VAPB-205ENST00000476395 SLC4A7Q9Y6M7 1214 aa8.77□□□□□ -1
VAPB-205ENST00000476395 DOCK1Q14185 1865 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 CLUHO75153 1309 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 DENND3A2RUS2 1198 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 LIASO43766 372 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 DESP17661 470 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 MAPK4P31152 587 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 ZNF132P52740 706 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 MTMR1Q13613 665 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
VAPB-205ENST00000476395 CCNG2Q16589 344 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 TMEM110Q86TL2 294 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 VPS52Q8N1B4 723 aa8.77□□□□□ -1.01
VAPB-205ENST00000476395 WDTC1Q8N5D0 677 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms