RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TMEM8AQ9HCN3 771 aa22.56■■□□□ 1.2
LIME1-204ENST00000476183 HEBP1Q9NRV9 189 aa22.56■■□□□ 1.2
LIME1-204ENST00000476183 TICRRQ7Z2Z1 1910 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 ARNTLO00327 626 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 CLDN5O00501 218 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 EPB41P11171 864 aaKnown RBP22.55■■□□□ 1.2
LIME1-204ENST00000476183 CD72P21854 359 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 GRIK1P39086 918 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 ANP32AP39687 249 aaKnown RBP22.55■■□□□ 1.2
LIME1-204ENST00000476183 PTPN5P54829 565 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 TXNDC8Q6A555 127 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 MAB21L3Q8N8X9 362 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 DNASE1L2Q92874 299 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 SHDQ96IW2 340 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 SPATA17Q96L03 361 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 TSG101Q99816 390 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
LIME1-204ENST00000476183 HMGXB4Q9UGU5 601 aa22.55■■□□□ 1.2
LIME1-204ENST00000476183 MTF2Q9Y483 593 aaPredicted RBP22.55■■□□□ 1.2
LIME1-204ENST00000476183 F8VP50 259 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 DCNP07585 359 aaKnown RBP22.54■■□□□ 1.2
LIME1-204ENST00000476183 P4HA1P13674 534 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 CCNE1P24864 410 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 GTF2H1P32780 548 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 USP46P62068 366 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 NOP14P78316 857 aaKnown RBP22.54■■□□□ 1.2
LIME1-204ENST00000476183 FKBP3Q00688 224 aaKnown RBP22.54■■□□□ 1.2
LIME1-204ENST00000476183 FCHO2Q0JRZ9 810 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 ORC1Q13415 861 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 MORC3Q14149 939 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 TPRG1Q6ZUI0 275 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 CCDC105Q8IYK2 499 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 CMTM8Q8IZV2 173 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 SEMA4DQ92854 862 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 IRF7Q92985 503 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 DLGAP2Q9P1A6 1054 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 UXTQ9UBK9 157 aaPredicted RBP22.54■■□□□ 1.2
LIME1-204ENST00000476183 SIT1Q9Y3P8 196 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 ANAPC1Q9H1A4 1944 aa22.54■■□□□ 1.2
LIME1-204ENST00000476183 ZNF638Q14966 1978 aaKnown RBP22.54■■□□□ 1.2
LIME1-204ENST00000476183 KANSL1LA0AUZ9 987 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 PPP1R3GB7ZBB8 358 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 ZNF263O14978 683 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 SLC16A3O15427 465 aaKnown RBP22.53■■□□□ 1.2
LIME1-204ENST00000476183 GLULP15104 373 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 NDST1P52848 882 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 UBE2HP62256 183 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 LRRC63Q05C16 580 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 KRT39Q6A163 491 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 PAQR9Q6ZVX9 377 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 MON1AQ86VX9 555 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 DTWD2Q8NBA8 298 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 PJA1Q8NG27 643 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 MRPS31Q92665 395 aaKnown RBP22.53■■□□□ 1.2
LIME1-204ENST00000476183 DHTKD1Q96HY7 919 aaPredicted RBP22.53■■□□□ 1.2
LIME1-204ENST00000476183 C8orf48Q96LL4 319 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 BCO2Q9BYV7 579 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 ELOVL4Q9GZR5 314 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 TRPV5Q9NQA5 729 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 OBP2AQ9NY56 170 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 CCL26Q9Y258 94 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 MYO15AQ9UKN7 3530 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 DMDP11532 3685 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 MIA3Q5JRA6 1907 aa22.53■■□□□ 1.2
LIME1-204ENST00000476183 H0Y858 1186 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 BIN1O00499 593 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 DPYSL4O14531 572 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 PSMA7O14818 248 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 TRIM66O15016 1216 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 DDX6P26196 483 aaKnown RBP eCLIP22.52■■□□□ 1.24e-8■■□□□ 14.4
LIME1-204ENST00000476183 ANXA13P27216 316 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 DENND5BQ6ZUT9 1274 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 ACOT1Q86TX2 421 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 ZFYVE19Q96K21 471 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 TNIP3Q96KP6 325 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 CEP295NLQ96MC4 621 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 TWNKQ96RR1 684 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 DUSP9Q99956 384 aaKnown RBP22.52■■□□□ 1.2
LIME1-204ENST00000476183 ZMYM5Q9UJ78 669 aa22.52■■□□□ 1.2
LIME1-204ENST00000476183 CHADO15335 359 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 MXI1P50539 228 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 STIM1Q13586 685 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 KLHL10Q6JEL2 608 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 FAM35AQ86V20 835 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 YAF2Q8IY57 180 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 CRYBG2Q8N1P7 616 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 RIN3Q8TB24 985 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 USP13Q92995 863 aaPredicted RBP22.51■■□□□ 1.19
LIME1-204ENST00000476183 SLC22A12Q96S37 553 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 PHOX2BQ99453 314 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 TTLL2Q9BWV7 592 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 IMPG2Q9BZV3 1241 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 LTB4R2Q9NPC1 389 aa22.51■■□□□ 1.19
LIME1-204ENST00000476183 KIF26AQ9ULI4 1882 aaPredicted RBP22.51■■□□□ 1.19
LIME1-204ENST00000476183 CACNA1IQ9P0X4 2223 aa22.5■■□□□ 1.19
LIME1-204ENST00000476183 SOBPA7XYQ1 873 aa22.5■■□□□ 1.19
LIME1-204ENST00000476183 TARSP26639 723 aaKnown RBP22.5■■□□□ 1.19
LIME1-204ENST00000476183 AVPR1AP37288 418 aa22.5■■□□□ 1.19
LIME1-204ENST00000476183 INCA1Q0VD86 236 aa22.5■■□□□ 1.19
LIME1-204ENST00000476183 UBXN2BQ14CS0 331 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms