RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 P4HA1P13674 534 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 ETS1P14921 441 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 IFT88Q13099 833 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 NAA25Q14CX7 972 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 POLNQ7Z5Q5 900 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 EXOC3L1Q86VI1 746 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 M0QYV0 167 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 SKAP2O75563 359 aaPredicted RBP16.8■□□□□ 0.28
VARS2-207ENST00000476162 SLC8A1P32418 973 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 PSMC4P43686 418 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 ARSEP51690 589 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 GTF2A2P52657 109 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 ZNF268Q14587 947 aaPredicted RBP16.8■□□□□ 0.28
VARS2-207ENST00000476162 OASLQ15646 514 aaKnown RBP16.8■□□□□ 0.28
VARS2-207ENST00000476162 KYAT1Q16773 422 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 FNIP1Q8TF40 1166 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 C9orf72Q96LT7 481 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 MORF4L1Q9UBU8 362 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
VARS2-207ENST00000476162 PLXNB2O15031 1838 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 GOLGA6L7A0A1B0GV03 622 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 MMP3P08254 477 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 GCKP35557 465 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 GPD2P43304 727 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
VARS2-207ENST00000476162 NDST1P52848 882 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 VCPP55072 806 aaKnown RBP16.79■□□□□ 0.28
VARS2-207ENST00000476162 PLCB3Q01970 1234 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 CNGA2Q16280 664 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 CCHCR1Q8TD31 782 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 ATXN2LQ8WWM7 1075 aaKnown RBP16.79■□□□□ 0.28
VARS2-207ENST00000476162 MAML3Q96JK9 1138 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 ADPGKQ9BRR6 497 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 TMEM121Q9BTD3 319 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 SAE1Q9UBE0 346 aaPredicted RBP16.79■□□□□ 0.28
VARS2-207ENST00000476162 CTNNAL1Q9UBT7 734 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 ITGA11Q9UKX5 1188 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 DRG1Q9Y295 367 aaKnown RBP16.79■□□□□ 0.28
VARS2-207ENST00000476162 C2CD2Q9Y426 696 aa16.79■□□□□ 0.28
VARS2-207ENST00000476162 KRT7P08729 469 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 VDRP11473 427 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 DYNLT1P63172 113 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 RBP5P82980 135 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 GPS1Q13098 491 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 E2F5Q15329 346 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 KIZQ2M2Z5 673 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 TAOK1Q7L7X3 1001 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 ZCCHC9Q8N567 271 aaKnown RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 OR6J1Q8NGC5 347 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 RBM15Q96T37 977 aaKnown RBP eCLIP16.78■□□□□ 0.28
VARS2-207ENST00000476162 INTS9Q9NV88 658 aaKnown RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 PCSK1NQ9UHG2 260 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 BARX2Q9UMQ3 279 aaPredicted RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 IQCA1LA6NCM1 817 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 HMGCRP04035 888 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 RELL1Q8IUW5 271 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 ARHGEF2Q92974 986 aaKnown RBP16.78■□□□□ 0.28
VARS2-207ENST00000476162 MCRS1Q96EZ8 462 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 KIF9Q9HAQ2 790 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 BATF3Q9NR55 127 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 SETD4Q9NVD3 440 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
VARS2-207ENST00000476162 PIK3R2O00459 728 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 ITGAVP06756 1048 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 CD48P09326 243 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 KDELR1P24390 212 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.28
VARS2-207ENST00000476162 GABRB2P47870 512 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 INCA1Q0VD86 236 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 ACVR2BQ13705 512 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 GRB14Q14449 540 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 CPLX4Q7Z7G2 160 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 ITFG2Q969R8 447 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 CHMP6Q96FZ7 201 aa16.77■□□□□ 0.28
VARS2-207ENST00000476162 C5orf60A6NFR6 353 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 FOXO6A8MYZ6 492 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 SGK1O00141 431 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 ADCY6O43306 1168 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 CST8O60676 142 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 IFNB1P01574 187 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 RPSAP08865 295 aaKnown RBP16.77■□□□□ 0.27
VARS2-207ENST00000476162 CREB1P16220 341 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 CYP3A5P20815 502 aa16.77■□□□□ 0.27
VARS2-207ENST00000476162 DRD4P21917 467 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms