RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 BFSP1Q12934 665 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 SOWAHAQ2M3V2 549 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 DCAF17Q5H9S7 520 aaPredicted RBP16.68■□□□□ 0.26
CPSF3-203ENST00000475482 LMBRD2Q68DH5 695 aaPredicted RBP16.68■□□□□ 0.26
CPSF3-203ENST00000475482 GAREM2Q75VX8 874 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 CNGA4Q8IV77 575 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 DCP1BQ8IZD4 617 aaKnown RBP16.68■□□□□ 0.26
CPSF3-203ENST00000475482 PHOX2BQ99453 314 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 IL21Q9HBE4 155 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 ZNF334Q9HCZ1 680 aaPredicted RBP16.68■□□□□ 0.26
CPSF3-203ENST00000475482 TMLHEQ9NVH6 421 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 OBSL1O75147 1896 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 PTPRDP23468 1912 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 COL4A3Q01955 1670 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 GTPBP10A4D1E9 387 aaKnown RBP16.67■□□□□ 0.26
CPSF3-203ENST00000475482 SHISA7A6NL88 538 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 HUS1O60921 280 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 TBX2Q13207 712 aaPredicted RBP16.67■□□□□ 0.26
CPSF3-203ENST00000475482 TEAD2Q15562 447 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 SLC44A4Q53GD3 710 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 ITIH5Q86UX2 942 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 OSTM1Q86WC4 334 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 ZNF397Q8NF99 534 aaPredicted RBP16.67■□□□□ 0.26
CPSF3-203ENST00000475482 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 SHDQ96IW2 340 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 CGRRF1Q99675 332 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 TRPV5Q9NQA5 729 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
CPSF3-203ENST00000475482 SNX9Q9Y5X1 595 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 NCANO14594 1321 aa16.67■□□□□ 0.26
CPSF3-203ENST00000475482 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
CPSF3-203ENST00000475482 GREB1Q4ZG55 1949 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 MYO15AQ9UKN7 3530 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 A0A1W2PRU2 124 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 AKR1B15C9JRZ8 316 aaPredicted RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 H0Y858 1186 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 FGF19O95750 216 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 TNNC2P02585 160 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 KRT19P08727 400 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 TRIM21P19474 475 aaKnown RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 WEE1P30291 646 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 LHX1P48742 406 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 VAMP7P51809 220 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 CLDN10P78369 228 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 TSPY1Q01534 308 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 MYO1EQ12965 1108 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 SYCP1Q15431 976 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 MLF2Q15773 248 aaPredicted RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 MGAT5BQ3V5L5 792 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 FIGNQ5HY92 759 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 INTS6LQ5JSJ4 861 aaKnown RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 FAM171BQ6P995 826 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 VITQ6UXI7 678 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 ALYREFQ86V81 257 aaKnown RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 DTWD2Q8NBA8 298 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 RDH13Q8NBN7 331 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
CPSF3-203ENST00000475482 TMC2Q8TDI7 906 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 KBTBD7Q8WVZ9 684 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 ZNF516Q92618 1163 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 DNASE1L2Q92874 299 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 SLC35C1Q96A29 364 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 LPIN3Q9BQK8 851 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 OSBPL6Q9BZF3 934 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 EDEM3Q9BZQ6 932 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 ABCB6Q9NP58 842 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 SIT1Q9Y3P8 196 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 PCDHB5Q9Y5E4 795 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
CPSF3-203ENST00000475482 FANCMQ8IYD8 2048 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 PROB1E7EW31 1015 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 P4HA2O15460 535 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
CPSF3-203ENST00000475482 CST3P01034 146 aaPredicted RBP16.65■□□□□ 0.26
CPSF3-203ENST00000475482 FAM163BP0C2L3 166 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 GLULP15104 373 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 HMGA1P17096 107 aaKnown RBP16.65■□□□□ 0.26
CPSF3-203ENST00000475482 PSMC3P17980 439 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 MYL7Q01449 175 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 GBP6Q6ZN66 633 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 MFSD6LQ8IWD5 586 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 ADGRF2Q8IZF7 708 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 PJA1Q8NG27 643 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 PLEKHO2Q8TD55 490 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 E2F7Q96AV8 911 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 RSPRY1Q96DX4 576 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 SEPT5Q99719 369 aaPredicted RBP16.65■□□□□ 0.26
CPSF3-203ENST00000475482 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 ABI2Q9NYB9 513 aaPredicted RBP16.65■□□□□ 0.26
CPSF3-203ENST00000475482 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
CPSF3-203ENST00000475482 ZFHX2Q9C0A1 2572 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms