RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 IFIT3O14879 490 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TMPRSS2O15393 492 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ACSL4O60488 711 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 HSF2BPO75031 334 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ATP9AO75110 1047 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CNOT3O75175 753 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ECDO95905 644 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ALBP02768 609 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ITGB3P05106 788 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RSPH10BP0C881 870 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MYZAPP0CAP1 466 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MYBL1P10243 752 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PCNAP12004 261 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 VAV1P15498 845 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNF3P17036 446 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GNAZP19086 355 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 POLR2CP19387 275 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CD247P20963 164 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 IGFALSP35858 605 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PCYT1AP49585 367 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RCAN1P53805 252 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PLTPP55058 493 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 S100A12P80511 92 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 NFIAQ12857 509 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 STK38Q15208 465 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TOMM20Q15388 145 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 STK11Q15831 433 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 GPR162Q16538 588 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FBXO43Q4G163 708 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 LIN52Q52LA3 116 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CAVIN4Q5BKX8 364 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MAP3K21Q5TCX8 1036 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 KIAA1614Q5VZ46 1190 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ARMCX5Q6P1M9 558 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MRPL10Q7Z7H8 261 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ITIH5Q86UX2 942 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SPATA24Q86W54 205 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 WFDC8Q8IUA0 241 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TRIM59Q8IWR1 403 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 POU5F2Q8N7G0 328 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 TEX19Q8NA77 164 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CCDC12Q8WUD4 166 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 CYB5D2Q8WUJ1 264 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RUFY2Q8WXA3 655 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 BRF1Q92994 677 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 USP7Q93009 1102 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 LRRC59Q96AG4 307 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 EME1Q96AY2 570 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SGK3Q96BR1 496 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 RAB3IPQ96QF0 476 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SEC62Q99442 399 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 APOL5Q9BWW9 433 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 MRPL1Q9BYD6 325 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SNX25Q9H3E2 840 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 C8orf33Q9H7E9 229 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 HACD3Q9P035 362 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 WHRNQ9P202 907 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 DBF4Q9UBU7 674 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 ZNHIT2Q9UHR6 403 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 LNPEPQ9UIQ6 1025 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 DNAJC16Q9Y2G8 782 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 PPP2R2CQ9Y2T4 447 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 EMC9Q9Y3B6 208 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 SBNO1A3KN83 1393 aa6.3□□□□□ -1.4
ECHDC1-215ENST00000475319 KDM6AO15550 1401 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PHLPP1O60346 1717 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 STRCP1A6NGW2 1772 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 ROBO1Q9Y6N7 1651 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 ADGRL2O95490 1459 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 OR6C65A6NJZ3 312 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CCT8L1PA6NM43 557 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SHOXO15266 292 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 RNF113AO15541 343 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 RNGTTO60942 597 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 TJP3O95049 919 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 KLHL2O95198 593 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 KRT75O95678 551 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 FYNP06241 537 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 ABCB1P08183 1280 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PDHA1P08559 390 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 PABPC4LP0CB38 370 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 KCNA3P22001 575 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CRABP2P29373 138 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SERPINB3P29508 390 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 GNA11P29992 359 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 KRT20P35900 424 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SLC1A1P43005 524 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 USP14P54578 494 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 SSTP61278 116 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CD83Q01151 205 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 LRRC74AQ0VAA2 488 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 AP1B1Q10567 949 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 CUL1Q13616 776 aa6.29□□□□□ -1.4
ECHDC1-215ENST00000475319 MOGSQ13724 837 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms