RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ANKRD52Q8NB46 1076 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 CCDC26Q8TAB7 109 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 URGCPQ8TCY9 931 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 STK32AQ8WU08 396 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 MAIP1Q8WWC4 291 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 SEPT8Q92599 483 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 MCRS1Q96EZ8 462 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 CPXM1Q96SM3 734 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 KRT12Q99456 494 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 AP1M1Q9BXS5 423 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 DPEP3Q9H4B8 488 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 ARFGAP3Q9NP61 516 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 USTQ9Y2C2 406 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
PCCB-213ENST00000475214 TDRD15B5MCY1 1934 aaKnown RBP10.77□□□□□ -0.69
PCCB-213ENST00000475214 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 CASTOR2A6NHX0 329 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 GABRDO14764 452 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 INPPL1O15357 1258 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 GJB6O95452 261 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 PFKMP08237 780 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 PYGMP11217 842 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ODC1P11926 461 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 DESP17661 470 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 PSMA2P25787 234 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ADORA2BP29275 332 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ACADSBP45954 432 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 MARCKSL1P49006 195 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 AFF1P51825 1210 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 VSNL1P62760 191 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 FAM189BP81408 668 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 FPGSQ05932 587 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 BST2Q10589 180 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 ACAP1Q15027 740 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 CC2D1AQ6P1N0 951 aaPredicted RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 MAATS1Q7Z4T9 603 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 RTN4RL1Q86UN2 441 aaPredicted RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 OSTM1Q86WC4 334 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 TTC30AQ86WT1 665 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 METTL23Q86XA0 190 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ZDHHC17Q8IUH5 632 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 NIPA2Q8N8Q9 360 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 B3GALNT2Q8NCR0 500 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 SPATA18Q8TC71 538 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 SLC35F5Q8WV83 523 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 HNRNPLLQ8WVV9 542 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 APBB2Q92870 758 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 GUCD1Q96NT3 240 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 COL25A1Q9BXS0 654 aaPredicted RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 ELAC1Q9H777 363 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 CYLDQ9NQC7 956 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 DDX43Q9NXZ2 648 aaKnown RBP10.76□□□□□ -0.69
PCCB-213ENST00000475214 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 NME7Q9Y5B8 376 aa10.76□□□□□ -0.69
PCCB-213ENST00000475214 E5RJQ4 531 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 RNF8O76064 485 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 B3GAT3O94766 335 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 ZRANB2O95218 330 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCCB-213ENST00000475214 PARNO95453 639 aaKnown RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 TIMP1P01033 207 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 CCDC130P13994 396 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 PTPN1P18031 435 aaKnown RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 AARSP49588 968 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCCB-213ENST00000475214 RGS7P49802 495 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 TAS2R40P59535 323 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 PDE4CQ08493 712 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 FAAP100Q0VG06 881 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 PPIGQ13427 754 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■□□□ 13.1
PCCB-213ENST00000475214 SHHQ15465 462 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 HADHQ16836 314 aaKnown RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 PLEKHG4Q58EX7 1191 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 ODF2Q5BJF6 829 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 NOMO2Q5JPE7 1267 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 FAM102AQ5T9C2 384 aaPredicted RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 LRRC38Q5VT99 294 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 DCLRE1AQ6PJP8 1040 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 TMEM110Q86TL2 294 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 SLC13A5Q86YT5 568 aaPredicted RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
PCCB-213ENST00000475214 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 KATNAL2Q8IYT4 538 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 TMEM199Q8N511 208 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 EXD1Q8NHP7 514 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 SLC2A14Q8TDB8 520 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 RUNDC3BQ96NL0 473 aa10.75□□□□□ -0.69
PCCB-213ENST00000475214 FAM193BQ96PV7 902 aaPredicted RBP10.75□□□□□ -0.69
PCCB-213ENST00000475214 HNRNPABQ99729 332 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms