RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ARCQ7LC44 396 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 ACOT1Q86TX2 421 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 TTC30AQ86WT1 665 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF280BQ86YH2 543 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 FUKQ8N0W3 1084 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 NIPA2Q8N8Q9 360 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 C12orf29Q8N999 325 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 B3GALNT2Q8NCR0 500 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 C3orf20Q8ND61 904 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 MYRIPQ8NFW9 859 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 OR6B3Q8NGW1 331 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 FNIP1Q8TF40 1166 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 TOP1MTQ969P6 601 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF689Q96CS4 500 aaPredicted RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 HSFY1Q96LI6 401 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 HEXIM2Q96MH2 286 aaKnown RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 ACBD6Q9BR61 282 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 MRPL9Q9BYD2 267 aaKnown RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 PPP1R12CQ9BZL4 782 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 SNX25Q9H3E2 840 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 DPEP3Q9H4B8 488 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 CSNK1G1Q9HCP0 422 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 MRPL47Q9HD33 250 aaKnown RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 SEPT11Q9NVA2 429 aaKnown RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 PARVAQ9NVD7 372 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 CNOT8Q9UFF9 292 aaKnown RBP7□□□□□ -1.29
ATG4A-207ENST00000474825 TSPAN16Q9UKR8 245 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 CDH9Q9ULB4 789 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 STRIP2Q9ULQ0 834 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 CEP83Q9Y592 693 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 ALG6Q9Y672 507 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 SAR1BQ9Y6B6 198 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 SCINQ9Y6U3 715 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 COL4A6Q14031 1691 aa7□□□□□ -1.29
ATG4A-207ENST00000474825 CARNS1A5YM72 827 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 SIGLEC16A6NMB1 481 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 MIF4GDA9UHW6 222 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ENC1O14682 589 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 NRP1O14786 923 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 DDX3YO15523 660 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TBC1D4O60343 1298 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 URI1O94763 535 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PROSCO94903 275 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ALDH2P05091 517 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ITGB1P05556 798 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 GALTP07902 379 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ODC1P11926 461 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 FGFR3P22607 806 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CTNNA2P26232 953 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PCSK1P29120 753 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 SLC1A1P43005 524 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 NOP2P46087 812 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PLA2G4AP47712 749 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PEX5P50542 639 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 BCAT1P54687 386 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 INSM1Q01101 510 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PDCLQ13371 301 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ORC1Q13415 861 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 DSTYKQ6XUX3 929 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 MMS22LQ6ZRQ5 1243 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ERICH1Q86X53 443 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 XYLT1Q86Y38 959 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CREG2Q8IUH2 290 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ZDHHC17Q8IUH5 632 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PASD1Q8IV76 773 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 RNF168Q8IYW5 571 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 RASGEF1CQ8N431 466 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TMEM199Q8N511 208 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TTC13Q8NBP0 860 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 C1orf131Q8NDD1 294 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TET1Q8NFU7 2136 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 FEZF2Q8TBJ5 459 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 MYCBPAPQ8TBZ2 947 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF564Q8TBZ8 553 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 KCTD13Q8WZ19 329 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF592Q92610 1267 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 ZNF653Q96CK0 615 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 C18orf8Q96DM3 657 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CPXM1Q96SM3 734 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 C11orf70Q9BRQ4 267 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 NUP85Q9BW27 656 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 DUSP16Q9BY84 665 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 MIS12Q9H081 205 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PDCL3Q9H2J4 239 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CWH43Q9H720 699 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CRTAC1Q9NQ79 661 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 MARCH5Q9NX47 278 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 DDX43Q9NXZ2 648 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CTTNBP2NLQ9P2B4 639 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 CACNG4Q9UBN1 327 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 DNAJB4Q9UDY4 337 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 PUF60Q9UHX1 559 aaKnown RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 TTC7AQ9ULT0 858 aaPredicted RBP6.99□□□□□ -1.29
ATG4A-207ENST00000474825 INPP5FQ9Y2H2 1132 aa6.99□□□□□ -1.29
ATG4A-207ENST00000474825 HYOU1Q9Y4L1 999 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms