RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SMIM10L2AP0DMW4 78 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SMIM10L2BP0DMW5 78 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CTNNA1P35221 906 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RHBDL3P58872 404 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GOLGA7BQ2TAP0 167 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FASTKD1Q53R41 847 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HECTD3Q5T447 861 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FAM117BQ6P1L5 589 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 VSIG1Q86XK7 387 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 BRSK2Q8IWQ3 736 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RASEFQ8IZ41 740 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GIMAP7Q8NHV1 300 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CD99L2Q8TCZ2 262 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FAR2Q96K12 515 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HSFY1Q96LI6 401 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 EGFL8Q99944 293 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 OSBPL1AQ9BXW6 950 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 UPF3AQ9H1J1 476 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 EPC1Q9H2F5 836 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ATXN3LQ9H3M9 355 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RETREG1Q9H6L5 497 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SYNDIG1Q9H7V2 258 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NHEJ1Q9H9Q4 299 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SCUBE2Q9NQ36 999 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 A1CFQ9NQ94 594 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FANCLQ9NW38 375 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 RSPH14Q9UHP6 348 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TRHDEQ9UKU6 1024 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PCDHA2Q9Y5H9 948 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF536O15090 1300 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TARSL2A2RTX5 802 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HEATR9A2RTY3 570 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 KLRG2A4D1S0 409 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DDTLA6NHG4 134 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HACD1B0YJ81 288 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SPATA31C2B4DYI2 1134 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DNM1LO00429 736 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MAN2B1O00754 1011 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ENC1O14682 589 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NPC1O15118 1278 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PSTPIP1O43586 416 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MAFO75444 373 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MOCS2O96007 188 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 INHAP05111 366 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TYMPP19971 482 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CXCR2P25025 360 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 VCPP55072 806 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CUL2Q13617 745 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DRAP1Q14919 205 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HSP90AA4PQ58FG1 418 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TMTC4Q5T4D3 741 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 IZUMO3Q5VZ72 239 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SYT10Q6XYQ8 523 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NOP9Q86U38 636 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 WDR75Q8IWA0 830 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 HS6ST3Q8IZP7 471 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ACER1Q8TDN7 264 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 DDI1Q8WTU0 396 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CLIC6Q96NY7 704 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GBP5Q96PP8 586 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PANX3Q96QZ0 392 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 OSBPL9Q96SU4 736 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NFKBIZQ9BYH8 718 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MORF4L1Q9UBU8 362 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SUSD2Q9UGT4 822 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CRLS1Q9UJA2 301 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PCDHA13Q9Y5I0 950 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 UBIAD1Q9Y5Z9 338 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CDY2AQ9Y6F7 541 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 COL2A1P02458 1487 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ROBO3Q96MS0 1386 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 BTBD19C9JJ37 291 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SUPT3HO75486 399 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TADA3O75528 432 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 MLYCDO95822 493 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SLC10A3P09131 477 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CNPP09543 421 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 GZMAP12544 262 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 LCP1P13796 627 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PFKLP17858 780 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 KCNA4P22459 653 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 KRT20P35900 424 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ATP5C1P36542 298 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CDH6P55285 790 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 SNRPD1P62314 119 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TROAPQ12815 778 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 NME3Q13232 169 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TUSC3Q13454 348 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 TOB2Q14106 344 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 LRRC41Q15345 812 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ADCK5Q3MIX3 580 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 FAM171A1Q5VUB5 890 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 ZNF544Q6NX49 715 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 VSTM4Q8IW00 320 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 PDCD6IPQ8WUM4 868 aaKnown RBP4.82□□□□□ -1.64
CCNL1-215ENST00000474539 CASKIN2Q8WXE0 1202 aa4.82□□□□□ -1.64
CCNL1-215ENST00000474539 AHCYL2Q96HN2 611 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms