RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZNF260Q3ZCT1 412 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 TREML2Q5T2D2 321 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 PPP4R3AQ6IN85 833 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 CYB5RLQ6IPT4 315 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 TMEM108Q6UXF1 575 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 CHSY1Q86X52 802 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 FAM109AQ8N4B1 249 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 PNLDC1Q8NA58 520 aaKnown RBP4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 ATRIPQ8WXE1 791 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 C1GALT1C1Q96EU7 318 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 C5orf34Q96MH7 638 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 CNPPD1Q9BV87 410 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 PRDM11Q9NQV5 511 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 C1orf112Q9NSG2 853 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 CFAP97Q9P2B7 532 aa4.51□□□□□ -1.69
TMEM50B-208ENST00000474272 M0QYG6 137 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 UBXN7O94888 489 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 TUBB4AP04350 444 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 HOXB6P17509 224 aaKnown RBP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 ZNF134P52741 427 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 USP37Q86T82 979 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 TTC7BQ86TV6 843 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 CCDC146Q8IYE0 955 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 TNPO1Q92973 898 aaKnown RBP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 CGRRF1Q99675 332 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 TINAGL1Q9GZM7 467 aaPredicted RBP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 VPS16Q9H269 839 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 MAN1C1Q9NR34 630 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 SIDT1Q9NXL6 827 aaKnown RBP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 SERTAD3Q9UJW9 196 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 CACNA1IQ9P0X4 2223 aa4.5□□□□□ -1.69
TMEM50B-208ENST00000474272 FRMPD2Q68DX3 1309 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 CCDC194A0A1B0GVG4 234 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 TUSC2O75896 110 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 NXPH3O95157 252 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 FTLP02792 175 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 IL6RP08887 468 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 RARBP10826 455 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 PRDX5P30044 214 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 NR4A2P43354 598 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 MMP13P45452 471 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 PIK3CGP48736 1102 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 PDE1AP54750 535 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 NOGQ13253 232 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 AARS2Q5JTZ9 985 aaKnown RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 ZNF618Q5T7W0 954 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 CCSAPQ6IQ19 270 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 CATSPERGQ6ZRH7 1159 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 CHST15Q7LFX5 561 aaPredicted RBP4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 FAM46DQ8NEK8 389 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 TBC1D5Q92609 795 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 B3GNT5Q9BYG0 378 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 TTYH3Q9C0H2 523 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 PRSS22Q9GZN4 317 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 STXBP5LQ9Y2K9 1186 aa4.49□□□□□ -1.69
TMEM50B-208ENST00000474272 SLC16A6O15403 523 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 PDE8BO95263 885 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 CHEK2O96017 543 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 FESP07332 822 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 HTR1BP28222 390 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 HK3P52790 923 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 KIF22Q14807 665 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 MAP9Q49MG5 647 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 RUSC1-AS1Q66K80 236 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 SWSAP1Q6NVH7 229 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 ANKRD16Q6P6B7 361 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 PPP1R32Q7Z5V6 425 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 DTX2Q86UW9 622 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 COL23A1Q86Y22 540 aaPredicted RBP4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 FAM90A1Q86YD7 464 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 PLBD2Q8NHP8 589 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 CYP2W1Q8TAV3 490 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 TMEM60Q9H2L4 133 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 ARNT2Q9HBZ2 717 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 DUSP22Q9NRW4 184 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 RLIMQ9NVW2 624 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 SLC52A1Q9NWF4 448 aa4.48□□□□□ -1.69
TMEM50B-208ENST00000474272 FAM227AF5H4B4 570 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 TPP1O14773 563 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 ADAMTS3O15072 1205 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 DCLK1O15075 740 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 CAND2O75155 1236 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 SOAT2O75908 522 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 AHSGP02765 367 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 RHCEP18577 417 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 AGFG1P52594 562 aaKnown RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 FOXG1P55316 489 aaPredicted RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 RHDQ02161 417 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 HLTFQ14527 1009 aaKnown RBP eCLIP4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 Q4G0T1 1027 aa4.47□□□□□ -1.69
TMEM50B-208ENST00000474272 THEMIS2Q5TEJ8 643 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms