RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SMYD3Q9H7B4 428 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 LTB4R2Q9NPC1 389 aa11.93□□□□□ -0.5
CKS1B-206ENST00000474215 MRPS17Q9Y2R5 130 aaKnown RBP11.93□□□□□ -0.5
CKS1B-206ENST00000474215 SHISA7A6NL88 538 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ARNTLO00327 626 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 MAN2B1O00754 1011 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 TRIM66O15016 1216 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 CETN3O15182 167 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 LRRN2O75325 713 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 PRAMEF12O95522 483 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ASS1P00966 412 aaKnown RBP11.92□□□□□ -0.5
CKS1B-206ENST00000474215 HLA-DRAP01903 254 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ANXA13P27216 316 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 AVPR1AP37288 418 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 GCLMP48507 274 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 MLLT6P55198 1093 aaPredicted RBP11.92□□□□□ -0.5
CKS1B-206ENST00000474215 PPP3CAQ08209 521 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ANGPT1Q15389 498 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 TXNDC8Q6A555 127 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 CSGALNACT1Q8TDX6 532 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 ERCC4Q92889 916 aaPredicted RBP11.92□□□□□ -0.5
CKS1B-206ENST00000474215 EEF2KMTQ96G04 330 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 TNIP3Q96KP6 325 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 C8orf48Q96LL4 319 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 BCO2Q9BYV7 579 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 SMG9Q9H0W8 520 aaKnown RBP11.92□□□□□ -0.5
CKS1B-206ENST00000474215 SDCBP2Q9H190 292 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 FAM86C1Q9NVL1 165 aa11.92□□□□□ -0.5
CKS1B-206ENST00000474215 THG1LQ9NWX6 298 aaKnown RBP11.92□□□□□ -0.5
CKS1B-206ENST00000474215 F8VP50 259 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 NCAM2O15394 837 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 KINO60870 393 aaKnown RBP11.91□□□□□ -0.5
CKS1B-206ENST00000474215 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
CKS1B-206ENST00000474215 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 GTF2H1P32780 548 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 PIK3CAP42336 1068 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 MRE11P49959 708 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
CKS1B-206ENST00000474215 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 ADSSL1Q8N142 457 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 BPIFB1Q8TDL5 484 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 FAM3CQ92520 227 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 USP13Q92995 863 aaPredicted RBP11.91□□□□□ -0.5
CKS1B-206ENST00000474215 CLDN23Q96B33 292 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 TSG101Q99816 390 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 IMPG2Q9BZV3 1241 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 ELOVL4Q9GZR5 314 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 EHD2Q9NZN4 543 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 PIAS3Q9Y6X2 628 aa11.91□□□□□ -0.5
CKS1B-206ENST00000474215 CLDN5O00501 218 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 STX10O60499 249 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TADA3O75528 432 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 EPB41P11171 864 aaKnown RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TARSP26639 723 aaKnown RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 MAGEA9P43362 315 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ASPAP45381 313 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 RPS9P46781 194 aaKnown RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 KPNA1P52294 538 aaPredicted RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 NDST1P52848 882 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 USP46P62068 366 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 FKBP3Q00688 224 aaKnown RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 FZD5Q13467 585 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 KRT39Q6A163 491 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ISM2Q6H9L7 571 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ACOT1Q86TX2 421 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 C1orf210Q8IVY1 113 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 CRYBG2Q8N1P7 616 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TAS1R2Q8TE23 839 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ZFYVE19Q96K21 471 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 CYP2S1Q96SQ9 504 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TTLL2Q9BWV7 592 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ZNF518BQ9C0D4 1074 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 C8orf33Q9H7E9 229 aaPredicted RBP11.9□□□□□ -0.5
CKS1B-206ENST00000474215 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 CCL26Q9Y258 94 aa11.9□□□□□ -0.5
CKS1B-206ENST00000474215 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 TRAV19A0A0A6YYK7 116 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 C2orf78A6NCI8 922 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 PROB1E7EW31 1015 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 PSMA7O14818 248 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 USP17L7P0C7H9 530 aa11.89□□□□□ -0.51
CKS1B-206ENST00000474215 HDCP19113 662 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms