RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF479Q96JC4 524 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 CCDC17Q96LX7 622 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 NLRP4Q96MN2 994 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 GPR35Q9HC97 309 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 INTUQ9ULD6 942 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 MAFFQ9ULX9 164 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 MAPRE3Q9UPY8 281 aa2.69□□□□□ -1.98
CCDC39-203ENST00000473854 TRIP12Q14669 1992 aaPredicted RBP2.69□□□□□ -1.98
CCDC39-203ENST00000473854 BRINP1O60477 761 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 CGAP01215 116 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 CYP19A1P11511 503 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-203ENST00000473854 MYCLP12524 364 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-203ENST00000473854 THBS4P35443 961 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF135P52742 658 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-203ENST00000473854 GAS1P54826 345 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 SCAND1P57086 179 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 BMS1Q14692 1282 aaKnown RBP2.68□□□□□ -1.98
CCDC39-203ENST00000473854 C21orf62-AS1Q17RA5 79 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 LAYNQ6UX15 382 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 NR2C2APQ86WQ0 139 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 XAGE5Q8WWM1 108 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 APPBP2Q92624 585 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 DPF2Q92785 391 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 ATP2A3Q93084 1043 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 TMEM184CQ9NVA4 438 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.68□□□□□ -1.98
CCDC39-203ENST00000473854 GABRQQ9UN88 632 aa2.68□□□□□ -1.98
CCDC39-203ENST00000473854 IGLV5-39A0A0G2JS06 123 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 A1L4Q6 167 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 SYF2O95926 243 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 GJB1P08034 283 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 CTSAP10619 480 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 OSMP13725 252 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 LOXL3P58215 753 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 PSMC1P62191 440 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 RPL36AP83881 106 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 TLE1Q04724 770 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 SF3A1Q15459 793 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 INPP5JQ15735 1006 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 L1TD1Q5T7N2 865 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 TMEM108Q6UXF1 575 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 UBE2Q1Q7Z7E8 422 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF329Q86UD4 541 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 SLC15A3Q8IY34 581 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 NRG4Q8WWG1 115 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 MAP4K1Q92918 833 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 WBP2Q969T9 261 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 LMLNQ96KR4 655 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 KANSL2Q9H9L4 492 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 CCM2LQ9NUG4 571 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 DNMT3BQ9UBC3 853 aaKnown RBP2.67□□□□□ -1.98
CCDC39-203ENST00000473854 GPR45Q9Y5Y3 372 aa2.67□□□□□ -1.98
CCDC39-203ENST00000473854 TCRBV5S1A1TA0A578 114 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 VPS4BO75351 444 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 CAMTA2O94983 1202 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 GNAI2P04899 355 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 RARBP10826 455 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 CHRM3P20309 590 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 ALDH5A1P51649 535 aaPredicted RBP2.66□□□□□ -1.98
CCDC39-203ENST00000473854 SLC16A1P53985 500 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 ZNF280AP59817 542 aaPredicted RBP2.66□□□□□ -1.98
CCDC39-203ENST00000473854 CFHR1Q03591 330 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 SLC9C1Q4G0N8 1177 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 MANEAQ5SRI9 462 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 LIX1LQ8IVB5 337 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 SFTPA1Q8IWL2 248 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 GLG1Q92896 1179 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 R3HDM4Q96D70 268 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 MRGPRX4Q96LA9 322 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 CAMK1GQ96NX5 476 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 NTPCRQ9BSD7 190 aaKnown RBP2.66□□□□□ -1.98
CCDC39-203ENST00000473854 ZBTB40Q9NUA8 1239 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 SERTAD3Q9UJW9 196 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 ICAM5Q9UMF0 924 aa2.66□□□□□ -1.98
CCDC39-203ENST00000473854 GRID2O43424 1007 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 PDE8BO95263 885 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 ATXN1LP0C7T5 689 aaKnown RBP2.65□□□□□ -1.99
CCDC39-203ENST00000473854 FTH1P19P0C7X4 201 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 AGXTP21549 392 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 GPR3P46089 330 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 HSF1Q00613 529 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 SATB1Q01826 763 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 DDR1Q08345 913 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 MTX1Q13505 466 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 NFATC4Q14934 902 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 ZNF750Q32MQ0 723 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 DDX46Q7L014 1031 aaKnown RBP2.65□□□□□ -1.99
CCDC39-203ENST00000473854 PPP1R32Q7Z5V6 425 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 CMIPQ8IY22 773 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 FBXL14Q8N1E6 418 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 IQCF1Q8N6M8 205 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 SOCS4Q8WXH5 440 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 ATG4AQ8WYN0 398 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 MMS19Q96T76 1030 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 PTDSS2Q9BVG9 487 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 DPCDQ9BVM2 203 aaPredicted RBP2.65□□□□□ -1.99
CCDC39-203ENST00000473854 ARHGAP39Q9C0H5 1083 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 TMEM8AQ9HCN3 771 aa2.65□□□□□ -1.99
CCDC39-203ENST00000473854 SEMA4BQ9NPR2 832 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms