RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GIPC3Q8TF64 312 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 VMP1Q96GC9 406 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CHP1Q99653 195 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CTRCQ99895 268 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 NUF2Q9BZD4 464 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ANKRD2Q9GZV1 360 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ACSS3Q9H6R3 686 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 C12orf10Q9HB07 376 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CLIC5Q9NZA1 410 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 BRCA1P38398 1863 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 A0A1W2PQU0 124 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 VILLO15195 856 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 OPHN1O60890 802 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 EPHX1P07099 455 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 PABPC1P11940 636 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 RXRAP19793 462 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CETN2P41208 172 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 PREPP48147 710 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 GSSP48637 474 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 PCYT1AP49585 367 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 VPS41P49754 854 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 HNRNPDQ14103 355 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 GRIK4Q16099 956 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 SV2CQ496J9 727 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 PRRT3Q5FWE3 981 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 NIPAL1Q6NVV3 410 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ITIH5Q86UX2 942 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 TOR1AIP2Q8NFQ8 470 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 OR2W6PQ8NHA6 318 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 DNAJB8Q8NHS0 232 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 TTC8Q8TAM2 541 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 XAGE3Q8WTP9 111 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 UBLCP1Q8WVY7 318 aaPredicted RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 NRG4Q8WWG1 115 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 SDCCAG3Q96C92 435 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 VWCEQ96DN2 955 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 BIRC8Q96P09 236 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 APBA2Q99767 749 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 DDX50Q9BQ39 737 aaKnown RBP5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 SELENOSQ9BQE4 189 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 NEURL2Q9BR09 285 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 TBC1D10AQ9BXI6 508 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 TCP11L1Q9NUJ3 509 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 DNAJB4Q9UDY4 337 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 KIAA1257Q9ULG3 409 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ZBTB1Q9Y2K1 713 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 CD2APQ9Y5K6 639 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 COL4A3BPQ9Y5P4 624 aa5.4□□□□□ -1.55
TMEM39A-206ENST00000473684 ARFGEF1Q9Y6D6 1849 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 MYH7BA7E2Y1 1941 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 C10orf71Q711Q0 1435 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PFDN6O15212 129 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SGTAO43765 313 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ENTPD5O75356 428 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PEX14O75381 377 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ALX3O95076 343 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 EIF2B2P49770 351 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 RPS3AP61247 264 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 COG7P83436 770 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TGFBIQ15582 683 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TUBA3EQ6PEY2 450 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TREML4Q6UXN2 200 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 C4orf50Q6ZRC1 276 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 VSIG1Q86XK7 387 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 COL23A1Q86Y22 540 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ENAHQ8N8S7 591 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ATL1Q8WXF7 558 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 STMN2Q93045 179 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SGF29Q96ES7 293 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PRICKLE1Q96MT3 831 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 MED15Q96RN5 788 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PRMT1Q99873 361 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 KLHL25Q9H0H3 589 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ADAM7Q9H2U9 754 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TBC1D23Q9NUY8 699 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ZDHHC7Q9NXF8 308 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PLK2Q9NYY3 685 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 FBXL5Q9UKA1 691 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 KCNH3Q9ULD8 1083 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 NOSIPQ9Y314 301 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF536O15090 1300 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CARMIL3Q8ND23 1372 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TNS3Q68CZ2 1445 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 A0A1W2PQC6 194 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 KRBA1A5PL33 1030 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CAPN9O14815 690 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 HAT1O14929 419 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 TRMUO75648 421 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PSMG1O95456 288 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 NUDT17P0C025 328 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CDH3P22223 829 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 CRABP2P29373 138 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 RASSF7Q02833 373 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 PRKG1Q13976 671 aa5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 RABL6Q3YEC7 729 aaPredicted RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 HEATR6Q6AI08 1181 aaKnown RBP5.39□□□□□ -1.55
TMEM39A-206ENST00000473684 SPOPLQ6IQ16 392 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms