RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ATP2C1P98194 919 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TSPY1Q01534 308 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PDGFRLQ15198 375 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 SV2CQ496J9 727 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PLK5Q496M5 336 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 DAB2IPQ5VWQ8 1189 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TXNDC8Q6A555 127 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 SLFN12LQ6IEE8 588 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 FSTL4Q6MZW2 842 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 SYT13Q7L8C5 426 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 GPBP1Q86WP2 473 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CREBRFQ8IUR6 639 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 RPLP0P6Q8NHW5 317 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 ACDQ96AP0 544 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 P2RY13Q9BPV8 354 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 REEP2Q9BRK0 252 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 LSM14BQ9BX40 385 aaKnown RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 TRPC7Q9HCX4 862 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 HPS4Q9NQG7 708 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 DPP3Q9NY33 737 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 UXTQ9UBK9 157 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CCDC39Q9UFE4 941 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 CCL26Q9Y258 94 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 C2CD2Q9Y426 696 aa7.45□□□□□ -1.22
CKS1B-205ENST00000473344 ANO9A1A5B4 782 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 OTOL1A6NHN0 477 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 SOBPA7XYQ1 873 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 H3BQV1 296 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 KHNYNO15037 678 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ZZEF1O43149 2961 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 FAM189A1O60320 539 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 F11P03951 625 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 PROS1P07225 676 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ADRB2P07550 413 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ARSAP15289 507 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 GJA4P35212 333 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 PNPLA4P41247 253 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 IFNAR2P48551 515 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 NOVA1P51513 510 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 RPL10AP62906 217 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 FAM160A1Q05DH4 1040 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 FOXC1Q12948 553 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 NR1H3Q13133 447 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 DMC1Q14565 340 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 MTF1Q14872 753 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 NFE2Q16621 373 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 USP39Q53GS9 565 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 WSCD1Q658N2 575 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ARL6IP4Q66PJ3 421 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 SMYD5Q6GMV2 418 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 TCEAL6Q6IPX3 200 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 C11orf74Q86VG3 221 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 MON1AQ86VX9 555 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 PDCL2Q8N4E4 241 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 FSIP1Q8NA03 581 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 KCNN1Q92952 543 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 CD101Q93033 1021 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ATP2A3Q93084 1043 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 TCEAL3Q969E4 200 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 CHFRQ96EP1 664 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 AK8Q96MA6 479 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 PI4K2AQ9BTU6 479 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 DUSP15Q9H1R2 295 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ECT2Q9H8V3 914 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 DUS2Q9NX74 493 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 FAM13BQ9NYF5 915 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 EBF1Q9UH73 591 aa7.44□□□□□ -1.22
CKS1B-205ENST00000473344 AGO2Q9UKV8 859 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 R3HCC1Q9Y3T6 440 aaKnown RBP7.44□□□□□ -1.22
CKS1B-205ENST00000473344 ACACBO00763 2458 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 UQCRHLA0A096LP55 91 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TRAV19A0A0A6YYK7 116 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 C4orf47A7E2U8 309 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 DCLK1O15075 740 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 SLC26A4O43511 780 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 HUS1O60921 280 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 IL18RAPO95256 599 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 UQCRHP07919 91 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 USP17L7P0C7H9 530 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 HMGA1P17096 107 aaKnown RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 GTF2BQ00403 316 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 MYL7Q01449 175 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF252P-AS1Q0IIN9 211 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF268Q14587 947 aaPredicted RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 KCNB1Q14721 858 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 DDR2Q16832 855 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM119Q4V9L6 283 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 SH3PXD2AQ5TCZ1 1133 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 UNQ6494/PRO21346Q6UXR6 183 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM150AQ86TG1 271 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 LRRTM3Q86VH5 581 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TTC30AQ86WT1 665 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TSTD1Q8NFU3 115 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms