RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 DCNP07585 359 aaKnown RBP16.62■□□□□ 0.25
MRPL55-226ENST00000473066 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
MRPL55-226ENST00000473066 PTPN1P18031 435 aaKnown RBP16.62■□□□□ 0.25
MRPL55-226ENST00000473066 PPP1R2P41236 205 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 PRCPP42785 496 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 ARHGAP29Q52LW3 1261 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 ZNF852Q6ZMS4 543 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 BPIFB1Q8TDL5 484 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 MED10Q9BTT4 135 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 BCO2Q9BYV7 579 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 LTB4R2Q9NPC1 389 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
MRPL55-226ENST00000473066 CHMP5Q9NZZ3 219 aa16.62■□□□□ 0.25
MRPL55-226ENST00000473066 F5P12259 2224 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 SOBPA7XYQ1 873 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 PRAMEF12O95522 483 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 F11P03951 625 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 WEE1P30291 646 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 MAGEA9P43362 315 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 GCLMP48507 274 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 TCERG1LQ5VWI1 586 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 DENND5BQ6ZUT9 1274 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 GPIHBP1Q8IV16 184 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 CMTM8Q8IZV2 173 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
MRPL55-226ENST00000473066 MAB21L3Q8N8X9 362 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-226ENST00000473066 MSANTD3Q96H12 275 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 NELL2Q99435 816 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 OSBPL6Q9BZF3 934 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 TMEM8AQ9HCN3 771 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 TRPC7Q9HCX4 862 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 TRPV5Q9NQA5 729 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 PIAS3Q9Y6X2 628 aa16.61■□□□□ 0.25
MRPL55-226ENST00000473066 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 CKMP06732 381 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 MXI1P50539 228 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 PDE6CP51160 858 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 KPNA1P52294 538 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 CDH8P55286 799 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 FCHO2Q0JRZ9 810 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 ANGPT1Q15389 498 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 KRT39Q6A163 491 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 C1orf228Q6PIY5 440 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 MON1AQ86VX9 555 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 RSPRY1Q96DX4 576 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
MRPL55-226ENST00000473066 SLC46A2Q9BY10 475 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 FAM86C1Q9NVL1 165 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 NCANO14594 1321 aa16.6■□□□□ 0.25
MRPL55-226ENST00000473066 TRAV19A0A0A6YYK7 116 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 FAM170BA6NMN3 283 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 F8VP50 259 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 CD72P21854 359 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 GTF2H1P32780 548 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 PPP3CAQ08209 521 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 C1orf220Q5T0J3 134 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 TXNDC8Q6A555 127 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 SPOPLQ6IQ16 392 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 CC2D1AQ6P1N0 951 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-226ENST00000473066 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-226ENST00000473066 SPATA20Q8TB22 786 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 SMARCD1Q96GM5 515 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 C8orf48Q96LL4 319 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 ZNF518BQ9C0D4 1074 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 SMG9Q9H0W8 520 aaKnown RBP16.59■□□□□ 0.25
MRPL55-226ENST00000473066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■■■ 165.1
MRPL55-226ENST00000473066 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 TRPM5Q9NZQ8 1165 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 NDRG2Q9UN36 371 aaKnown RBP16.59■□□□□ 0.25
MRPL55-226ENST00000473066 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
MRPL55-226ENST00000473066 TADA3O75528 432 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 USP17L7P0C7H9 530 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 GLULP15104 373 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 TARSP26639 723 aaKnown RBP16.58■□□□□ 0.24
MRPL55-226ENST00000473066 IFRD2Q12894 506 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-226ENST00000473066 TMEM150AQ86TG1 271 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 ACOT1Q86TX2 421 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 UNC93AQ86WB7 457 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 ADSSL1Q8N142 457 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 TTC16Q8NEE8 873 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 TAS1R2Q8TE23 839 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 FAM3CQ92520 227 aa16.58■□□□□ 0.24
MRPL55-226ENST00000473066 EEF2KMTQ96G04 330 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms