RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ATRIPQ8WXE1 791 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 C3orf49Q96BT1 292 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ASIC4Q96FT7 647 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ZNF764Q96H86 408 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 PKNOX2Q96KN3 472 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DDX23Q9BUQ8 820 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 MAGEB5Q9BZ81 275 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DPH1Q9BZG8 443 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 KCNH6Q9H252 994 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ST6GALNAC4Q9H4F1 302 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 HELLSQ9NRZ9 838 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 GALNT8Q9NY28 637 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ADAMTS6Q9UKP5 1117 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 KDM5CP41229 1560 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ITIH6Q6UXX5 1313 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 A0A087WWL8 130 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQ27 194 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQ64 194 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQC6 194 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQD8 194 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM90A20PA6NIJ5 464 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DCLK1O15075 740 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 BEST1O76090 585 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 HEXIM1O94992 359 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 SGPL1O95470 568 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 IL1R2P27930 398 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 TLX1P31314 330 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 CSF2RBP32927 897 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PBX3P40426 434 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 AFF3P51826 1226 aaKnown RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 ZNF134P52741 427 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 YBEYP58557 167 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 NPY5RQ15761 445 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 CSRP2Q16527 193 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 FAM214AQ32MH5 1076 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PAOXQ6QHF9 649 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 NME9Q86XW9 330 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 CCDC117Q8IWD4 279 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 SNX33Q8WV41 574 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 THAP4Q8WY91 577 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 ELP4Q96EB1 424 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 REEP2Q9BRK0 252 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 HTATIP2Q9BUP3 242 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 PDGFDQ9GZP0 370 aaPredicted RBP2.98□□□□□ -1.93
XRN1-210ENST00000472697 SAYSD1Q9NPB0 183 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 CYP46A1Q9Y6A2 500 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 KIF14Q15058 1648 aa2.98□□□□□ -1.93
XRN1-210ENST00000472697 DENND4BO75064 1496 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 CDHR4A6H8M9 788 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 VWA3AA6NCI4 1184 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 CLCA1A8K7I4 914 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C19orf81C9J6K1 198 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 ADM5C9JUS6 153 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 M0QZQ0 153 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 IGF2BP3O00425 579 aaKnown RBP eCLIP2.97□□□□□ -1.93
XRN1-210ENST00000472697 RTCAO00442 366 aaKnown RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 KLK10O43240 276 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HNRNPRO43390 633 aaKnown RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 THAP12O43422 761 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 ANP32CO43423 234 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TOM1O60784 492 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 DIAPH2O60879 1101 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 NTSR2O95665 410 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SLC4A1P02730 911 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SRGAP2BP0DMP2 458 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 RAP2AP10114 183 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 EFNA5P52803 228 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SNX16P57768 344 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 DLG4P78352 724 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 MANEALQ5VSG8 457 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 MFSD5Q6N075 450 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 BEND5Q7L4P6 421 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 OTOP2Q7RTS6 562 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TMPRSS7Q7RTY8 843 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SCML4Q8N228 414 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C17orf53Q8N3J3 647 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 GPR150Q8NGU9 434 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 RFFLQ8WZ73 363 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 NKD2Q969F2 451 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 RTKNQ9BST9 563 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TXLNGYQ9BZA5 131 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 BRD8Q9H0E9 1235 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SPATA6Q9NWH7 488 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 TAF6LQ9Y6J9 622 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 FAM135AQ9P2D6 1515 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C9orf84Q5VXU9 1444 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 CTTNBP2Q8WZ74 1663 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C17orf113A0A1B0GUU1 675 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQJ5 194 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C2orf78A6NCI8 922 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 BTBD18B2RXH4 712 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 DHHO43323 396 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SGTAO43765 313 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 RRP9O43818 475 aaKnown RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 MTA2O94776 668 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TK1P04183 234 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 ITGB2P05107 769 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 PRKCBP05771 671 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 GRPP07492 148 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TXNP10599 105 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms