RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HESX1Q9UBX0 185 aa20.33■□□□□ 0.84
PSPC1-203ENST00000471658 MTMR11A4FU01 709 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 C2orf71A6NGG8 1288 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 EIF3CLB5ME19 914 aaKnown RBP20.32■□□□□ 0.84
PSPC1-203ENST00000471658 AP1G2O75843 785 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
PSPC1-203ENST00000471658 GPR65Q8IYL9 337 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 KLHL5Q96PQ7 755 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 KCNK16Q96T55 309 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 EIF3CQ99613 913 aaKnown RBP20.32■□□□□ 0.84
PSPC1-203ENST00000471658 SMOQ99835 787 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 DUSP16Q9BY84 665 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 LHX5Q9H2C1 402 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 KRT82Q9NSB4 513 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 FNIP2Q9P278 1114 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 SLC27A5Q9Y2P5 690 aa20.32■□□□□ 0.84
PSPC1-203ENST00000471658 ANXA13P27216 316 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 MAP3K7CLP57077 242 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
PSPC1-203ENST00000471658 LRIT3Q3SXY7 679 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 C2CD6Q53TS8 623 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 C4orf50Q6ZRC1 276 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 TMEM35BQ8NCS4 154 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 ZMIZ2Q8NF64 920 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.31■□□□□ 0.84
PSPC1-203ENST00000471658 TJP2Q9UDY2 1190 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 TFR2Q9UP52 801 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 SSX2IPQ9Y2D8 614 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 PCDHB5Q9Y5E4 795 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 A0A0U1RQJ8 604 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 NRDCO43847 1150 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 SOAT2O75908 522 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 LCA5LO95447 670 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 FTLP02792 175 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-203ENST00000471658 FAM200BP0CF97 657 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 CDH5P33151 784 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-203ENST00000471658 GPR15P49685 360 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 RGS7P49802 495 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 ADCY1Q08828 1119 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 RAB33AQ14088 237 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 NFE2Q16621 373 aaPredicted RBP20.31■□□□□ 0.84
PSPC1-203ENST00000471658 ACAD10Q6JQN1 1059 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 PMF1Q6P1K2 205 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 TRIM72Q6ZMU5 477 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 CLEC20AQ6ZU45 233 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 SLC35F5Q8WV83 523 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 ATRIPQ8WXE1 791 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 PACSIN1Q9BY11 444 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 IRAK3Q9Y616 596 aa20.31■□□□□ 0.84
PSPC1-203ENST00000471658 PIK3R2O00459 728 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 GABBR2O75899 941 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 ABLIM3O94929 683 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 SEC24AO95486 1093 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 SPATA31D3P0C874 917 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 NPR3P17342 541 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 NDUFV1P49821 464 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 BCAT1P54687 386 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 BST2Q10589 180 aaKnown RBP20.3■□□□□ 0.84
PSPC1-203ENST00000471658 DUSP4Q13115 394 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 SPATA31D4Q6ZUB0 917 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 PHLDB2Q86SQ0 1253 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 TRIM44Q96DX7 344 aaPredicted RBP20.3■□□□□ 0.84
PSPC1-203ENST00000471658 SMARCD1Q96GM5 515 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 NGRNQ9NPE2 291 aaKnown RBP20.3■□□□□ 0.84
PSPC1-203ENST00000471658 ADGRG1Q9Y653 693 aa20.3■□□□□ 0.84
PSPC1-203ENST00000471658 A0A1W2PPC1 479 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 RTN2O75298 545 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 LSM8O95777 96 aaKnown RBP20.29■□□□□ 0.84
PSPC1-203ENST00000471658 MAGEA1P43355 309 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 CENPCQ03188 943 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 CFAP221Q4G0U5 840 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 SDHAF4Q5VUM1 108 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 SCN4BQ8IWT1 228 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 ZNF461Q8TAF7 563 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 CPXM1Q96SM3 734 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 ISCUQ9H1K1 167 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 AFF4Q9UHB7 1163 aaKnown RBP20.29■□□□□ 0.84
PSPC1-203ENST00000471658 CEP83Q9Y592 693 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 PCDHA13Q9Y5I0 950 aa20.29■□□□□ 0.84
PSPC1-203ENST00000471658 F8VP50 259 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 LPXNO60711 386 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 GZMAP12544 262 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 KLRC2P26717 231 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 CREMQ03060 361 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 SPA17Q15506 151 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 DDR2Q16832 855 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 PTPN20Q4JDL3 420 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 LLGL2Q6P1M3 1020 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 ADGRD2Q7Z7M1 963 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 STKLD1Q8NE28 680 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 SPPL2BQ8TCT7 592 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 FUBP3Q96I24 572 aaKnown RBP eCLIP20.28■□□□□ 0.841e-7■■■□□ 16.8
PSPC1-203ENST00000471658 C11orf70Q9BRQ4 267 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 EMILIN2Q9BXX0 1053 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 ZNF576Q9H609 170 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 CSNK1G1Q9HCP0 422 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 ST7Q9NRC1 585 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 ATP8B3O60423 1300 aa20.28■□□□□ 0.84
PSPC1-203ENST00000471658 RCCD1A6NED2 376 aa20.27■□□□□ 0.84
PSPC1-203ENST00000471658 SOX1O00570 391 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms