RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CCDC134Q9H6E4 229 aa19.57■□□□□ 0.72
COL20A1-205ENST00000471582 DOCK3Q8IZD9 2030 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 PCNTO95613 3336 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 CHN1P15882 459 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 PCK1P35558 622 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 ARSEP51690 589 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 NDST1P52848 882 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 MORF4L2Q15014 288 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 LONRF1Q17RB8 773 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 TMEM130Q8N3G9 435 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 MDM1Q8TC05 714 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 ATXN2LQ8WWM7 1075 aaKnown RBP19.56■□□□□ 0.72
COL20A1-205ENST00000471582 SELENOSQ9BQE4 189 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 NT5C1AQ9BXI3 368 aa19.56■□□□□ 0.72
COL20A1-205ENST00000471582 RNF8O76064 485 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 KDELR1P24390 212 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 IL1R2P27930 398 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 MAGEA9P43362 315 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 SLC27A1Q6PCB7 646 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 ACSF2Q96CM8 615 aaPredicted RBP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 RBM15Q96T37 977 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 GCOM2Q9BZD3 368 aaPredicted RBP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 ZWILCHQ9H900 591 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 ASNSD1Q9NWL6 643 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 LGALS13Q9UHV8 139 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 TPX2Q9ULW0 747 aaKnown RBP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 SHOC2Q9UQ13 582 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 A6NJR5 290 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 ZNF143P52747 638 aaPredicted RBP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 STAT4Q14765 748 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 EMC1Q8N766 993 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 CMASQ8NFW8 434 aaPredicted RBP19.55■□□□□ 0.72
COL20A1-205ENST00000471582 CHMP6Q96FZ7 201 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 TTC25Q96NG3 672 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 CCDC77Q9BR77 488 aa19.55■□□□□ 0.72
COL20A1-205ENST00000471582 NRCAMQ92823 1304 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 ECM2O94769 699 aaPredicted RBP19.54■□□□□ 0.72
COL20A1-205ENST00000471582 HOXA11P31270 313 aaPredicted RBP19.54■□□□□ 0.72
COL20A1-205ENST00000471582 RGS2P41220 211 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 GPS1Q13098 491 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 CRHR2Q13324 411 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 KIZQ2M2Z5 673 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 EXOC3L1Q86VI1 746 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 GLIS1Q8NBF1 620 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 SOCS4Q8WXH5 440 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 SNX27Q96L92 541 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 CNPY3Q9BT09 278 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 INTS9Q9NV88 658 aaKnown RBP19.54■□□□□ 0.72
COL20A1-205ENST00000471582 SETD4Q9NVD3 440 aa19.54■□□□□ 0.72
COL20A1-205ENST00000471582 A0A087WUV0 522 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 DYNC1LI2O43237 492 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 KIAA0754O94854 1291 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 NPTXRO95502 500 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 F2P00734 622 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 MAGEA4P43358 317 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 SMTNL2Q2TAL5 461 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 FAM102AQ5T9C2 384 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PAXIP1Q6ZW49 1069 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 RIBC1Q8N443 379 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 LRRC52Q8N7C0 313 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PHACTR1Q9C0D0 580 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 RASSF4Q9H2L5 321 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 DNAJC17Q9NVM6 304 aaKnown RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 TSPAN16Q9UKR8 245 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 SMIM35A0A1B0GVV1 85 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 MBLAC1A4D2B0 266 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 TRIM66O15016 1216 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CA12O43570 354 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CST8O60676 142 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CDH16O75309 829 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 GPR32O75388 356 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 TRUB2O95900 331 aaKnown RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 SETSIPP0DME0 302 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CYP3A5P20815 502 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 DRD4P21917 467 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 MIPP30301 263 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PLCB3Q01970 1234 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CCDC142Q17RM4 750 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 RNASEH2BQ5TBB1 312 aaKnown RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 NOTUMQ6P988 496 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PCGF5Q86SE9 256 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PRUNE1Q86TP1 453 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 C10orf67Q8IYJ2 551 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 ACTL9Q8TC94 416 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 ARHGEF2Q92974 986 aaKnown RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 CFAP57Q96MR6 1250 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 PWWP2AQ96N64 755 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 ZNF317Q96PQ6 595 aaPredicted RBP19.53■□□□□ 0.72
COL20A1-205ENST00000471582 USP18Q9UMW8 372 aa19.53■□□□□ 0.72
COL20A1-205ENST00000471582 SGK1O00141 431 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 ADCY6O43306 1168 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 ZSCAN5DPP0CG00 497 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 GPD1P21695 349 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 YARSP54577 528 aaKnown RBP19.52■□□□□ 0.72
COL20A1-205ENST00000471582 OTUD4Q01804 1114 aaKnown RBP19.52■□□□□ 0.72
COL20A1-205ENST00000471582 ZBTB6Q15916 424 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 KCNT1Q5JUK3 1230 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 OLFML2BQ68BL8 750 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 C6orf89Q6UWU4 347 aa19.52■□□□□ 0.72
COL20A1-205ENST00000471582 CATSPER4Q7RTX7 472 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms