RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 DISP1Q96F81 1524 aa3.47□□□□□ -1.85
CLIP4-209ENST00000471165 ARHGEF12Q9NZN5 1544 aa3.47□□□□□ -1.85
CLIP4-209ENST00000471165 SHANK2Q9UPX8 1470 aa3.47□□□□□ -1.85
CLIP4-209ENST00000471165 MYBBP1AQ9BQG0 1328 aaKnown RBP3.46□□□□□ -1.85
CLIP4-209ENST00000471165 FHOD3Q2V2M9 1422 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 FER1L4A9Z1Z3 1794 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 ZFYVE16Q7Z3T8 1539 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 EXOC3O60645 756 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 THBS4P35443 961 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 CLCN2P51788 898 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 OCRLQ01968 901 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 KEAP1Q14145 624 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 SERPINA13PQ6UXR4 307 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 SLC15A3Q8IY34 581 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 FAM109AQ8N4B1 249 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.46□□□□□ -1.86
CLIP4-209ENST00000471165 ZNF398Q8TD17 642 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 SMOC2Q9H3U7 446 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 JKAMPQ9P055 326 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 SIGLEC1Q9BZZ2 1709 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 ATP10AO60312 1499 aa3.46□□□□□ -1.86
CLIP4-209ENST00000471165 ALKQ9UM73 1620 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 NEMP1O14524 444 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 GRM6O15303 877 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 MTHFD1P11586 935 aaKnown RBP3.45□□□□□ -1.86
CLIP4-209ENST00000471165 CDC25AP30304 524 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 CTXN1P60606 82 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 FLYWCH1Q4VC44 716 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 C2orf27AQ580R0 203 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 TREML2Q5T2D2 321 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 VPS53Q5VIR6 699 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 DTX2Q86UW9 622 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 LRRC71Q8N4P6 559 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 TERB1Q8NA31 727 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 ATP2A3Q93084 1043 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 MED30Q96HR3 178 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 SNX18Q96RF0 628 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 ARHGAP39Q9C0H5 1083 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 SH2B3Q9UQQ2 575 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 CARMIL1Q5VZK9 1371 aa3.45□□□□□ -1.86
CLIP4-209ENST00000471165 TP53BP1Q12888 1972 aaPredicted RBP3.45□□□□□ -1.86
CLIP4-209ENST00000471165 CPS1P31327 1500 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 E9PLN8 166 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 UMODP07911 640 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 FGF2P09038 288 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 CD6P30203 668 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 RENBPP51606 427 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 PARS2Q7L3T8 475 aaKnown RBP3.44□□□□□ -1.86
CLIP4-209ENST00000471165 RASSF3Q86WH2 238 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 SPATA2LQ8IUW3 424 aaPredicted RBP3.44□□□□□ -1.86
CLIP4-209ENST00000471165 OSR1Q8TAX0 266 aaPredicted RBP3.44□□□□□ -1.86
CLIP4-209ENST00000471165 VKORC1Q9BQB6 163 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 ADI1Q9BV57 179 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 SNTG2Q9NY99 539 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.44□□□□□ -1.86
CLIP4-209ENST00000471165 EFCAB5A4FU69 1503 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 C9orf84Q5VXU9 1444 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 SCAPERQ9BY12 1400 aa3.44□□□□□ -1.86
CLIP4-209ENST00000471165 IQGAP2Q13576 1575 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 TCOF1Q13428 1488 aaKnown RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 MAGI2Q86UL8 1455 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 RAPGEF2Q9Y4G8 1499 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 TCRBV5S1A1TA0A578 114 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 TMEM232C9JQI7 657 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 POLRMTO00411 1230 aaKnown RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 SLC16A3O15427 465 aaKnown RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 SERPINB2P05120 415 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 LPOP22079 712 aaPredicted RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 ENPP1P22413 925 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 HOXC13P31276 330 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 PDE1AP54750 535 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 MGAT2Q10469 447 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 PABPC1LQ4VXU2 614 aaKnown RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 ZNF365Q70YC5 407 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 AFAP1Q8N556 730 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 AUTS2Q8WXX7 1259 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 MAP4K1Q92918 833 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 ACE2Q9BYF1 805 aaPredicted RBP3.43□□□□□ -1.86
CLIP4-209ENST00000471165 IFT122Q9HBG6 1241 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 LRRC7Q96NW7 1537 aa3.43□□□□□ -1.86
CLIP4-209ENST00000471165 ATP10BO94823 1461 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 SLC43A1O75387 559 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 PDE8BO95263 885 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 CTSAP10619 480 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 LSSP48449 732 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 NEK4P51957 841 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 MRPS9P82933 396 aaKnown RBP3.42□□□□□ -1.86
CLIP4-209ENST00000471165 MTX1Q13505 466 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 MUM1Q2TAK8 710 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 PDXDC1Q6P996 788 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 RP9Q8TA86 221 aaKnown RBP3.42□□□□□ -1.86
CLIP4-209ENST00000471165 THAP7Q9BT49 309 aaPredicted RBP3.42□□□□□ -1.86
CLIP4-209ENST00000471165 PACSIN1Q9BY11 444 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 MANSC1Q9H8J5 431 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 TMEM8AQ9HCN3 771 aa3.42□□□□□ -1.86
CLIP4-209ENST00000471165 PLA2R1Q13018 1463 aa3.41□□□□□ -1.86
CLIP4-209ENST00000471165 HECW1Q76N89 1606 aa3.41□□□□□ -1.86
CLIP4-209ENST00000471165 ABCA9Q8IUA7 1624 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms