RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MYO1FO00160 1098 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 CLDN5O00501 218 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 TRIM66O15016 1216 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 SART1O43290 800 aaKnown RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 MOCS3O95396 460 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 CYP1A2P05177 515 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 BDNFP23560 247 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 RRM1P23921 792 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 GRIK1P39086 918 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 PLA2G4AP47712 749 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 RGS7P49802 495 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 MAP3K7CLP57077 242 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 ETF1P62495 437 aaKnown RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 ZNF268Q14587 947 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 OR6B2Q6IFH4 312 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 FAM171BQ6P995 826 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 DAAM2Q86T65 1068 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 TMEM173Q86WV6 379 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 DNAAF5Q86Y56 855 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 FUKQ8N0W3 1084 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 OR10T2Q8NGX3 314 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 ZNF564Q8TBZ8 553 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 BCL7CQ8WUZ0 217 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 PIK3R5Q8WYR1 880 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 GOLGA1Q92805 767 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 CLP1Q92989 425 aaKnown RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 FUBP3Q96I24 572 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCM2-204ENST00000470837 B3GALT6Q96L58 329 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 SAMD11Q96NU1 681 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 RTP3Q9BQQ7 232 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 C11orf84Q9BUA3 381 aaPredicted RBP10.3□□□□□ -0.76
CCM2-204ENST00000470837 TRIM10Q9UDY6 481 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 DNAI1Q9UI46 699 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 TFR2Q9UP52 801 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 NME7Q9Y5B8 376 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 BACE2Q9Y5Z0 518 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 DUSP10Q9Y6W6 482 aa10.3□□□□□ -0.76
CCM2-204ENST00000470837 CTAGE9A4FU28 777 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 GOLGA8SH3BPF8 625 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ATMINO43313 823 aaPredicted RBP10.29□□□□□ -0.76
CCM2-204ENST00000470837 FBXO21O94952 628 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 OR4Q2P0C623 313 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 KRT3P12035 628 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 LCP1P13796 627 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 DNAJB2P25686 324 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ELF1P32519 619 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 BMPR1AP36894 532 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 DSG1Q02413 1049 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 GPR17Q13304 367 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 MRPL58Q14197 206 aaKnown RBP10.29□□□□□ -0.76
CCM2-204ENST00000470837 SMC1AQ14683 1233 aaKnown RBP10.29□□□□□ -0.76
CCM2-204ENST00000470837 SHHQ15465 462 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 CFAP221Q4G0U5 840 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 PTPN20Q4JDL3 420 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 C9orf50Q5SZB4 431 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 FAM102AQ5T9C2 384 aaPredicted RBP10.29□□□□□ -0.76
CCM2-204ENST00000470837 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 KIAA0319Q5VV43 1072 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 PRSS55Q6UWB4 352 aaPredicted RBP10.29□□□□□ -0.76
CCM2-204ENST00000470837 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 SYT10Q6XYQ8 523 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 NYAP1Q6ZVC0 841 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 TAS1R1Q7RTX1 841 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 TMC7Q7Z402 723 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 PHLDB2Q86SQ0 1253 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 SCN4BQ8IWT1 228 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 C3orf20Q8ND61 904 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 OLIG1Q8TAK6 271 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 SPPL2BQ8TCT7 592 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 MICAL1Q8TDZ2 1067 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 SLC35F5Q8WV83 523 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 UBE2Q2Q8WVN8 375 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ARHGEF26Q96DR7 871 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 CPXM1Q96SM3 734 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 LPIN3Q9BQK8 851 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 EMILIN2Q9BXX0 1053 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 UBXN6Q9BZV1 441 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ABCB6Q9NP58 842 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 CHST7Q9NS84 486 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 MTRRQ9UBK8 725 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 CDY1Q9Y6F8 540 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 MICAL3Q7RTP6 2002 aa10.29□□□□□ -0.76
CCM2-204ENST00000470837 SCN1AP35498 2009 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 PDCD11Q14690 1871 aaKnown RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
CCM2-204ENST00000470837 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.28□□□□□ -0.76
CCM2-204ENST00000470837 TMEM110-MUSTN1A8MSY1 372 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms