RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NFKBIEO00221 500 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 MED7O43513 233 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TMEM63AO94886 807 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ENDOD1O94919 500 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 APOC2P02655 101 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 GABRB2P47870 512 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 ATP11AP98196 1134 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 LAMTOR4Q0VGL1 99 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 MXD4Q14582 209 aaPredicted RBP14.32□□□□□ -0.12
BRCA1-209ENST00000470026 EFTUD2Q15029 972 aaKnown RBP eCLIP14.32□□□□□ -0.12
BRCA1-209ENST00000470026 METTL7BQ6UX53 244 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 CAPN12Q6ZSI9 719 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 VSIG1Q86XK7 387 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 XYLT1Q86Y38 959 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 BANPQ8N9N5 519 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 SEPT1Q8WYJ6 367 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 PAFAH2Q99487 392 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 VPS11Q9H270 941 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TLE6Q9H808 572 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 TJP2Q9UDY2 1190 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 STK38LQ9Y2H1 464 aa14.32□□□□□ -0.12
BRCA1-209ENST00000470026 BRCA1P38398 1863 aaKnown RBP14.31□□□□□ -0.12
BRCA1-209ENST00000470026 TCRBV7S3A2A0A539 114 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 ZBTB42B2RXF5 422 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 GOLGA8SH3BPF8 625 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 GOLGA8MH3BSY2 632 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 DHRS4L1P0CG22 281 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 TGFB3P10600 412 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 RAD23BP54727 409 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 CRYMQ14894 314 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 MAPK6Q16659 721 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 MPZL3Q6UWV2 235 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 C3orf62Q6ZUJ4 267 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 MCRS1Q96EZ8 462 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 RSRC1Q96IZ7 334 aaKnown RBP14.31□□□□□ -0.12
BRCA1-209ENST00000470026 TCHPQ9BT92 498 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 C2orf40Q9H1Z8 148 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 FZD8Q9H461 694 aa14.31□□□□□ -0.12
BRCA1-209ENST00000470026 RPL26L1Q9UNX3 145 aaKnown RBP14.31□□□□□ -0.12
BRCA1-209ENST00000470026 GOLGB1Q14789 3259 aaKnown RBP14.31□□□□□ -0.12
BRCA1-209ENST00000470026 LGR5O75473 907 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 FAM155BO75949 473 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 TCF7P36402 384 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-209ENST00000470026 PSMC4P43686 418 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SMTNL2Q2TAL5 461 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 LBX2Q6XYB7 198 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 RHPN2Q8IUC4 686 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ZBTB8OSQ8IWT0 167 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 UNC45BQ8IWX7 931 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 FBXO36Q8NEA4 188 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SH3TC2Q8TF17 1288 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ANKRD27Q96NW4 1050 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ZWILCHQ9H900 591 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SAR1AQ9NR31 198 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SLC5A4Q9NY91 659 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 KANSL3Q9P2N6 904 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 LNPEPQ9UIQ6 1025 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 TNNC2P02585 160 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 CD48P09326 243 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ADRA1DP25100 572 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 TARSP26639 723 aaKnown RBP14.3□□□□□ -0.12
BRCA1-209ENST00000470026 GBP2P32456 591 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-209ENST00000470026 PSMC1P62191 440 aaKnown RBP14.3□□□□□ -0.12
BRCA1-209ENST00000470026 TFAMQ00059 246 aaKnown RBP14.3□□□□□ -0.12
BRCA1-209ENST00000470026 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 PLEKHG4Q58EX7 1191 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 KCNT1Q5JUK3 1230 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SH2D5Q6ZV89 423 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 RIOX2Q8IUF8 465 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 EXOC8Q8IYI6 725 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 RNF149Q8NC42 400 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 C10orf88Q9H8K7 445 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 SIX4Q9UIU6 781 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
BRCA1-209ENST00000470026 ACKR2O00590 384 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 HGSO14964 777 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 HNRNPCL1O60812 293 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 TRUB2O95900 331 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 IL1BP01584 269 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 ERBB2P04626 1255 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 IBSPP21815 317 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 PCK1P35558 622 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 DYNLT1P63172 113 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 RNASELQ05823 741 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 DPYSL3Q14195 570 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 APOBEC3FQ8IUX4 373 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 PDIK1LQ8N165 341 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 TCP10LQ8TDR4 215 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 MIEF2Q96C03 454 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 THOC1Q96FV9 657 aaKnown RBP14.29□□□□□ -0.12
BRCA1-209ENST00000470026 ZNF570Q96NI8 536 aa14.29□□□□□ -0.12
BRCA1-209ENST00000470026 SDCBP2Q9H190 292 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms