RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SCINQ9Y6U3 715 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 MYBL1P10243 752 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 RARGP13631 454 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 SLC1A1P43005 524 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 NDST1P52848 882 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 RAD23BP54727 409 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 SNAPC2Q13487 334 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 SPOCD1Q6ZMY3 1216 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 MORC4Q8TE76 937 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 PMM1Q92871 262 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 TRIM11Q96F44 468 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 KLF6Q99612 283 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 FZD8Q9H461 694 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 ACTR5Q9H9F9 607 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 NINJ2Q9NZG7 142 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 RPS6KL1Q9Y6S9 549 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 MYO18AQ92614 2054 aaKnown RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 NPTXRO95502 500 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 PPIL2Q13356 520 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 CYP1B1Q16678 543 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 C1orf228Q6PIY5 440 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 TSHZ1Q6ZSZ6 1077 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 EXOC3L1Q86VI1 746 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 RFX6Q8HWS3 928 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 SCUBE3Q8IX30 993 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 LRRC34Q8IZ02 419 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 ZBED8Q8IZ13 594 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 ARFGAP1Q8N6T3 406 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 ACTL9Q8TC94 416 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 NDRG1Q92597 394 aaKnown RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 FAM81BQ96LP2 452 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 C12orf65Q9H3J6 166 aaKnown RBP9.91□□□□□ -0.82
TOP3A-203ENST00000469739 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
TOP3A-203ENST00000469739 TRIP11Q15643 1979 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 DNAJC25-GNG10A0A024R161 153 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 GOLGA8RI6L899 631 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 LRCH4O75427 683 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 MICAL2O94851 1124 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PECAM1P16284 738 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 CETN2P41208 172 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PHKA2P46019 1235 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 OTUD4Q01804 1114 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 KLF1Q13351 362 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PPP6R3Q5H9R7 873 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 FAM47EQ6ZV65 393 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 FASTKD5Q7L8L6 764 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 C4orf33Q8N1A6 199 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 MAB21L3Q8N8X9 362 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 KCTD6Q8NC69 237 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 ITFG2Q969R8 447 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 XPO6Q96QU8 1125 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 EIF2AQ9BY44 585 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PDZD7Q9H5P4 517 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PARP2Q9UGN5 583 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 GGA2Q9UJY4 613 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 HEY1Q9Y5J3 304 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 ATP8B3O60423 1300 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 TMEM120BA0PK00 339 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 E5RJQ4 531 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 FAM107AO95990 144 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 SMPD1P17405 629 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 IGFBP6P24592 240 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 ATXN1P54253 815 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 BEX3Q00994 111 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PTPN11Q06124 597 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 SLMAPQ14BN4 828 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 CDCA2Q69YH5 1023 aaPredicted RBP9.9□□□□□ -0.82
TOP3A-203ENST00000469739 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 TRIM72Q6ZMU5 477 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PLPPR4Q7Z2D5 763 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 NME8Q8N427 588 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 FAM71DQ8N9W8 422 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 SLC4A11Q8NBS3 891 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 CFAP57Q96MR6 1250 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 C2orf40Q9H1Z8 148 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 ADAM7Q9H2U9 754 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 PTPRHQ9HD43 1115 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 NEU2Q9Y3R4 380 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 SIP14410 1827 aa9.9□□□□□ -0.82
TOP3A-203ENST00000469739 POM121CA8CG34 1229 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 TRAPPC3O43617 180 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 CALB1P05937 261 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 ZNF132P52740 706 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 DRG2P55039 364 aaKnown RBP9.89□□□□□ -0.83
TOP3A-203ENST00000469739 EIF3BP55884 814 aaKnown RBP9.89□□□□□ -0.83
TOP3A-203ENST00000469739 BASP1P80723 227 aaKnown RBP9.89□□□□□ -0.83
TOP3A-203ENST00000469739 MPP2Q14168 576 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 TMEM132DQ14C87 1099 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 RBBP5Q15291 538 aaKnown RBP9.89□□□□□ -0.83
TOP3A-203ENST00000469739 AGBL2Q5U5Z8 902 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 ANKRD22Q5VYY1 191 aa9.89□□□□□ -0.83
TOP3A-203ENST00000469739 CATSPER4Q7RTX7 472 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms