RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 KRT4P19013 534 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 ABCB4P21439 1286 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 GTF2A2P52657 109 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 AP3M2P53677 418 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 SIGIRRQ6IA17 410 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 RINT1Q6NUQ1 792 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 ASRGL1Q7L266 308 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 PPM1KQ8N3J5 372 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 DGCR14Q96DF8 476 aaKnown RBP10.39□□□□□ -0.75
NUP50-214ENST00000469163 CCDC51Q96ER9 411 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 LSM14BQ9BX40 385 aaKnown RBP10.39□□□□□ -0.75
NUP50-214ENST00000469163 WDR6Q9NNW5 1121 aaKnown RBP10.39□□□□□ -0.75
NUP50-214ENST00000469163 TYW1Q9NV66 732 aaKnown RBP10.39□□□□□ -0.75
NUP50-214ENST00000469163 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
NUP50-214ENST00000469163 IL1RAPL1Q9NZN1 696 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 TBK1Q9UHD2 729 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 HAO1Q9UJM8 370 aa10.39□□□□□ -0.75
NUP50-214ENST00000469163 ARPC4-TTLL3A0A0A6YYG9 625 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 P4HBP07237 508 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 PSAPP07602 524 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 KRT13P13646 458 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 PRKACAP17612 351 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 COPB1P53618 953 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 OCRLQ01968 901 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 PTK2Q05397 1052 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 STRN3Q13033 797 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 LPIN1Q14693 890 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ZBED8Q8IZ13 594 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 NUP93Q8N1F7 819 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 KRT12Q99456 494 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 DENND2DQ9H6A0 471 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 DDX56Q9NY93 547 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 KLHL14Q9P2G3 628 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 SNX12Q9UMY4 172 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 A0A1B0GUL6 1792 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 A6NL46 340 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 CDK2AP1O14519 115 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 SNX2O60749 519 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 KCNJ13O60928 360 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 UNC5CO95185 931 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 KIZQ2M2Z5 673 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ISLR2Q6UXK2 745 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 NATD1Q8N6N6 113 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 TCF12Q99081 682 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 PYM1Q9BRP8 204 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 POLR3FQ9H1D9 316 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 AGO4Q9HCK5 861 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 ARMCX3Q9UH62 379 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 PCDHGA8Q9Y5G5 932 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 SMIM31A0A1B0GVY4 71 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 BICDL2A1A5D9 508 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 PPP1R3GB7ZBB8 358 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 CNOT3O75175 753 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 CD58P19256 250 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 WEE1P30291 646 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ARL1P40616 181 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 KHDC1Q4VXA5 237 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 BOLA3Q53S33 107 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 SPDYCQ5MJ68 293 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 NEK5Q6P3R8 708 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 LRIG3Q6UXM1 1119 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 KLHL7Q8IXQ5 586 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ENDOVQ8N8Q3 282 aaKnown RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 DAGLBQ8NCG7 672 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 OR7G1Q8NGA0 311 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 CALML6Q8TD86 181 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 ZBED3Q96IU2 234 aaPredicted RBP10.38□□□□□ -0.75
NUP50-214ENST00000469163 TTC1Q99614 292 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 PI4K2AQ9BTU6 479 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 CALN1Q9BXU9 219 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 RXFP1Q9HBX9 757 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 SETD4Q9NVD3 440 aa10.38□□□□□ -0.75
NUP50-214ENST00000469163 A0A1B0GTH6 734 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 ANO9A1A5B4 782 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 CCDC162PA2VCL2 907 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 WDR91A4D1P6 747 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 A8MX80 341 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 TXNDC9O14530 226 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 MCF2LO15068 1137 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 KRT36O76013 467 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 ARIH2O95376 493 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 AFPP02771 609 aaKnown RBP10.37□□□□□ -0.75
NUP50-214ENST00000469163 SPATA31C1P0DKV0 1188 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 PABPC1P11940 636 aaKnown RBP10.37□□□□□ -0.75
NUP50-214ENST00000469163 UBA1P22314 1058 aaKnown RBP10.37□□□□□ -0.75
NUP50-214ENST00000469163 HMOX2P30519 316 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 HSPA9P38646 679 aaKnown RBP10.37□□□□□ -0.75
NUP50-214ENST00000469163 ACADVLP49748 655 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 RASSF2P50749 326 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 CTAG1AP78358 180 aa10.37□□□□□ -0.75
NUP50-214ENST00000469163 KRT83P78385 493 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms