RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 STK31Q9BXU1 1019 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
LSM5-209ENST00000468872 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
LSM5-209ENST00000468872 A0A087WV62 115 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 MYO1CO00159 1063 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 POLRMTO00411 1230 aaKnown RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 MAST3O60307 1309 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TXNP10599 105 aaKnown RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 PLA2G5P39877 138 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 MPLP40238 635 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 HSD11B2P80365 405 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 MPP3Q13368 585 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TRIM14Q14142 442 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 AMOTQ4VCS5 1084 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 INO80DQ53TQ3 878 aaPredicted RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 PRR16Q569H4 304 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TAPT1Q6NXT6 567 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 AATKQ6ZMQ8 1374 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 FUBP1Q96AE4 644 aaKnown RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 RNF31Q96EP0 1072 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TMEM41AQ96HV5 264 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 PNKPQ96T60 521 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TTLL2Q9BWV7 592 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 PRDM13Q9H4Q3 707 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TMEM74BQ9NUR3 256 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 PTGFRNQ9P2B2 879 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 TESQ9UGI8 421 aaKnown RBP6.12□□□□□ -1.43
LSM5-209ENST00000468872 ITGB1BP2Q9UKP3 347 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 TBC1D30Q9Y2I9 924 aa6.12□□□□□ -1.43
LSM5-209ENST00000468872 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 DCLK1O15075 740 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 THAP12O43422 761 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 NBNO60934 754 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 GPANK1O95872 356 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 CHRM3P20309 590 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 EEF1GP26641 437 aaKnown RBP6.11□□□□□ -1.43
LSM5-209ENST00000468872 CXCR5P32302 372 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 VIPR2P41587 438 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 TECP42680 631 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 PIGFQ07326 219 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 ERCC6LQ2NKX8 1250 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 ANO1Q5XXA6 986 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 RNF44Q7L0R7 432 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 SYTL1Q8IYJ3 562 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 RAPGEF4Q8WZA2 1011 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 ZNF566Q969W8 418 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 VOPP1Q96AW1 172 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 Q96MF0 132 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 TRIB1Q96RU8 372 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 SMOQ99835 787 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 GALNT9Q9HCQ5 603 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 CTTNBP2NLQ9P2B4 639 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 KCNE5Q9UJ90 142 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 MID2Q9UJV3 735 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 PCSK5Q92824 1860 aa6.11□□□□□ -1.43
LSM5-209ENST00000468872 CLCA1A8K7I4 914 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 CREB3O43889 395 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 PLA2G6O60733 806 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 RASSF9O75901 435 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 WNT3P56703 355 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 ZNF844Q08AG5 666 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 ZRSR2Q15696 482 aaKnown RBP6.1□□□□□ -1.43
LSM5-209ENST00000468872 CCDC142Q17RM4 750 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 TAF2Q6P1X5 1199 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 CATSPERGQ6ZRH7 1159 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 BEND5Q7L4P6 421 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 SDR16C5Q8N3Y7 309 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 FANCBQ8NB91 859 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 PSD4Q8NDX1 1056 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 SIMC1Q8NDZ2 872 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 SLC9A6Q92581 669 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 C18orf8Q96DM3 657 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 SLC46A1Q96NT5 459 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 GDF15Q99988 308 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 MESP1Q9BRJ9 268 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 STK33Q9BYT3 514 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 TTYH3Q9C0H2 523 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 R3HDMLQ9H3Y0 253 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 AS3MTQ9HBK9 375 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 TBC1D23Q9NUY8 699 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 ZNF212Q9UDV6 495 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 MAN2B2Q9Y2E5 1009 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.1□□□□□ -1.43
LSM5-209ENST00000468872 INSL6Q9Y581 213 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 CEP83Q9Y592 693 aa6.1□□□□□ -1.43
LSM5-209ENST00000468872 SALL3Q9BXA9 1300 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 CCDC195A0A1B0GUA6 201 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 AREL1O15033 823 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 PIP5K1CO60331 668 aa6.09□□□□□ -1.43
LSM5-209ENST00000468872 A1BGP04217 495 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms