RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 TMEM9BQ9NQ34 198 aa16.61■□□□□ 0.25
SRRM1-207ENST00000468822 GTF3C4Q9UKN8 822 aa16.61■□□□□ 0.25
SRRM1-207ENST00000468822 KHNYNO15037 678 aaKnown RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 USP17L7P0C7H9 530 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 SCP2P22307 547 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 POLR2BP30876 1174 aaKnown RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 KCNA1Q09470 495 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 INTS6LQ5JSJ4 861 aaKnown RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 ARL6IP4Q66PJ3 421 aaKnown RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 TMEM92Q6UXU6 159 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 CCDC33Q8N5R6 958 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 FRMD1Q8N878 549 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 DEFB124Q8NES8 71 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 RAD54LQ92698 747 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 TMEM206Q9H813 350 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 DDX43Q9NXZ2 648 aaKnown RBP16.6■□□□□ 0.25
SRRM1-207ENST00000468822 PTPRDP23468 1912 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 ANAPC1Q9H1A4 1944 aa16.6■□□□□ 0.25
SRRM1-207ENST00000468822 TRAV19A0A0A6YYK7 116 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 ITGB3P05106 788 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 CEACAM1P13688 526 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 CSRP1P21291 193 aaKnown RBP16.59■□□□□ 0.25
SRRM1-207ENST00000468822 USP39Q53GS9 565 aaKnown RBP16.59■□□□□ 0.25
SRRM1-207ENST00000468822 KIAA1211LQ6NV74 962 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 CYP2U1Q7Z449 544 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 OLIG1Q8TAK6 271 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 RLN3Q8WXF3 142 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 CNOT6LQ96LI5 555 aaKnown RBP16.59■□□□□ 0.25
SRRM1-207ENST00000468822 ST6GALNAC4Q9H4F1 302 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 ABCB6Q9NP58 842 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 AGAP1Q9UPQ3 857 aa16.59■□□□□ 0.25
SRRM1-207ENST00000468822 SRRM3A6NNA2 597 aaPredicted RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 ATP2C2O75185 946 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 TBCAO75347 108 aaKnown RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 PPP1R37O75864 691 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 KRT18P05783 430 aaKnown RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 DHPSP49366 369 aaPredicted RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 USP46P62068 366 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 TFAMQ00059 246 aaKnown RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 UAP1L1Q3KQV9 507 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 SLFN12LQ6IEE8 588 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 POMGNT1Q8WZA1 660 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 PIGKQ92643 395 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 AK8Q96MA6 479 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 FNBP1Q96RU3 617 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 STRA6Q9BX79 667 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 TMEM74BQ9NUR3 256 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 UXTQ9UBK9 157 aaPredicted RBP16.58■□□□□ 0.24
SRRM1-207ENST00000468822 MMP17Q9ULZ9 603 aa16.58■□□□□ 0.24
SRRM1-207ENST00000468822 SCAMP3O14828 347 aaKnown RBP16.57■□□□□ 0.24
SRRM1-207ENST00000468822 IL18RAPO95256 599 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 UBA7P41226 1012 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 PTGER3P43115 390 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 SLC6A11P48066 632 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 POU5F1Q01860 360 aaKnown RBP16.57■□□□□ 0.24
SRRM1-207ENST00000468822 CRY1Q16526 586 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 CFAP221Q4G0U5 840 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 SFR1Q86XK3 245 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 SCN4BQ8IWT1 228 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 EXOC4Q96A65 974 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 SAAL1Q96ER3 474 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 ZDHHC4Q9NPG8 344 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 MBD1Q9UIS9 605 aaPredicted RBP16.57■□□□□ 0.24
SRRM1-207ENST00000468822 SIX4Q9UIU6 781 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 ARHGAP26Q9UNA1 814 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 PCNX2A6NKB5 2137 aa16.57■□□□□ 0.24
SRRM1-207ENST00000468822 TULP1O00294 542 aaPredicted RBP16.56■□□□□ 0.24
SRRM1-207ENST00000468822 GABRDO14764 452 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 SLC26A4O43511 780 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 HYAL3O43820 417 aaPredicted RBP16.56■□□□□ 0.24
SRRM1-207ENST00000468822 CYP17A1P05093 508 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 TCF3P15923 654 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 HDCP19113 662 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 PNPLA4P41247 253 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 EMC10Q5UCC4 262 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 FAM171BQ6P995 826 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 USP49Q70CQ1 688 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 TTC30AQ86WT1 665 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 ALLCQ8N6M5 410 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 FSCN3Q9NQT6 498 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 GDAP2Q9NXN4 497 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 SNX9Q9Y5X1 595 aa16.56■□□□□ 0.24
SRRM1-207ENST00000468822 HELZP42694 1942 aaKnown RBP16.56■□□□□ 0.24
SRRM1-207ENST00000468822 IGSF10Q6WRI0 2623 aa16.55■□□□□ 0.24
SRRM1-207ENST00000468822 TNRC6BQ9UPQ9 1833 aaKnown RBP16.55■□□□□ 0.24
SRRM1-207ENST00000468822 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.55■□□□□ 0.24
SRRM1-207ENST00000468822 SGK1O00141 431 aa16.55■□□□□ 0.24
SRRM1-207ENST00000468822 LEFTY2O00292 366 aa16.55■□□□□ 0.24
SRRM1-207ENST00000468822 HUS1O60921 280 aa16.55■□□□□ 0.24
SRRM1-207ENST00000468822 LMO2P25791 158 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms