RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 KLRC2P26717 231 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ACTN2P35609 894 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 FLT3P36888 993 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ACADSBP45954 432 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TAF6P49848 677 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 MRPS6P82932 125 aaKnown RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 KRT17Q04695 432 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF844Q08AG5 666 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 BYSLQ13895 437 aaKnown RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 OASLQ15646 514 aaKnown RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 SOWAHAQ2M3V2 549 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TTMPQ5BVD1 217 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 BBS12Q6ZW61 710 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 MRPL10Q7Z7H8 261 aaKnown RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 SERINC5Q86VE9 423 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 CCDC50Q8IVM0 306 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ARFGAP1Q8N6T3 406 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ANKRD52Q8NB46 1076 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 KLHDC9Q8NEP7 349 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TRPV1Q8NER1 839 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 FBXO22Q8NEZ5 403 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 SLC35B2Q8TB61 432 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TEKT4Q8WW24 435 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TMEM40Q8WWA1 233 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 RIN2Q8WYP3 895 aaPredicted RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 ARL8AQ96BM9 186 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TNIP3Q96KP6 325 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 HERPUD2Q9BSE4 406 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 DPH5Q9H2P9 285 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 EPB41L4BQ9H329 900 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 RSAD1Q9HA92 442 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 CHST7Q9NS84 486 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 HESX1Q9UBX0 185 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 HMGXB4Q9UGU5 601 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 PIN4Q9Y237 131 aaKnown RBP8.01□□□□□ -1.13
COL6A3-208ENST00000468792 IPPQ9Y573 584 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 TRPV2Q9Y5S1 764 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 SNX9Q9Y5X1 595 aa8.01□□□□□ -1.13
COL6A3-208ENST00000468792 GABRDO14764 452 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 GPR182O15218 404 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ADAMTS4O75173 837 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CABYRO75952 493 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 TOMM70O94826 608 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 TRUB2O95900 331 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 KRT1P04264 644 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 IVLP07476 585 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 RARBP10826 455 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ATF2P15336 505 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CAPN2P17655 700 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 GPD1P21695 349 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 FGFR4P22455 802 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 KDELR1P24390 212 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CTGFP29279 349 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 RPL9P32969 192 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 GNL1P36915 607 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 PTPN9P43378 593 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 KCNJ1P48048 391 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ARSEP51690 589 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 BCAT1P54687 386 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 VCPP55072 806 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 SLC6A3Q01959 620 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ADCY2Q08462 1091 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 MGAT3Q09327 533 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 PDK2Q15119 407 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CCDC142Q17RM4 750 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ODF2Q5BJF6 829 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 TNFAIP8L3Q5GJ75 292 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 GNASQ5JWF2 1037 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CEP85LQ5SZL2 805 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CYP4A22Q5TCH4 519 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 DENND2CQ68D51 928 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CCSAPQ6IQ19 270 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 MFSD5Q6N075 450 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 OLFML1Q6UWY5 402 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF365Q70YC5 407 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ZNF771Q7L3S4 317 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 PCGF5Q86SE9 256 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 PHLDB2Q86SQ0 1253 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 FAM228AQ86W67 206 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 PSTKQ8IV42 348 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 TMEM86AQ8N2M4 240 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 ALLCQ8N6M5 410 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 JOSD2Q8TAC2 188 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 UBLCP1Q8WVY7 318 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 KBTBD7Q8WVZ9 684 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 C1orf54Q8WWF1 131 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 RAPGEF5Q92565 580 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 CENPIQ92674 756 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 TLCD1Q96CP7 247 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 PPP1R10Q96QC0 940 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 PPP1R16BQ96T49 567 aa8□□□□□ -1.13
COL6A3-208ENST00000468792 MRPL45Q9BRJ2 306 aaKnown RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 SENP6Q9GZR1 1112 aaPredicted RBP8□□□□□ -1.13
COL6A3-208ENST00000468792 STMN4Q9H169 189 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms