RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZMYM5Q9UJ78 669 aa15.44■□□□□ 0.06
COL27A1-203ENST00000468565 CSH1P0DML2 217 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 CSH2P0DML3 217 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 LMO2P25791 158 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MAGEA11P43364 429 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 CDR1P51861 262 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 PTPN5P54829 565 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 NCOA4Q13772 614 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 ZACNQ401N2 412 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 ZNF658Q5TYW1 1059 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 INTS8Q75QN2 995 aaKnown RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 CCDC150Q8NCX0 1101 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MYRIPQ8NFW9 859 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 DEPDC1BQ8WUY9 529 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 SHDQ96IW2 340 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MKNK1Q9BUB5 465 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 SLITRK6Q9H5Y7 841 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MYH10P35580 1976 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 AKAP3O75969 853 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 HMGA1P17096 107 aaKnown RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 CYP2F1P24903 491 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 WEE1P30291 646 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 PSMC2P35998 433 aaKnown RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 GNL1P36915 607 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 VAMP7P51809 220 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 STARD6P59095 220 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MCCD1P59942 119 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 FANCCQ00597 558 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 PRKCQQ04759 706 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 ZNF667Q5HYK9 610 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 SMYD4Q8IYR2 804 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MLKLQ8NB16 471 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 DNASE1L2Q92874 299 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 TBC1D17Q9HA65 648 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 CRTAC1Q9NQ79 661 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 MAN1B1Q9UKM7 699 aa15.43■□□□□ 0.06
COL27A1-203ENST00000468565 GALR2O43603 387 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 NRDCO43847 1150 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 ATP2C2O75185 946 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 VNN1O95497 513 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 PSMC3P17980 439 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 GPR15P49685 360 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 PSMC1P62191 440 aaKnown RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 ADAM9Q13443 819 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 MLF2Q15773 248 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 CCDC142Q17RM4 750 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 C1orf220Q5T0J3 134 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 GPR158Q5T848 1215 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 VSTM1Q6UX27 236 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 VITQ6UXI7 678 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 SV2AQ7L0J3 742 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 FAM186BQ8IYM0 893 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 OR6B3Q8NGW1 331 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 MYCBPAPQ8TBZ2 947 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 TAF4BQ92750 862 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 MYLPFQ96A32 169 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 CEP295NLQ96MC4 621 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 TRMT61BQ9BVS5 477 aaKnown RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 MAGEC2Q9UBF1 373 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 NXF1Q9UBU9 619 aaKnown RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 NME7Q9Y5B8 376 aa15.42■□□□□ 0.06
COL27A1-203ENST00000468565 HELZP42694 1942 aaKnown RBP15.42■□□□□ 0.06
COL27A1-203ENST00000468565 SOBPA7XYQ1 873 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 NOL4O94818 638 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 PDGFRBP09619 1106 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 SKILP12757 684 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 RFX1P22670 979 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 VIPR2P41587 438 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 PRCPP42785 496 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 TCF15Q12870 199 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 DDR2Q16832 855 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 SGSM1Q2NKQ1 1148 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 SLC44A4Q53GD3 710 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 STXBP5Q5T5C0 1151 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 TMC6Q7Z403 805 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 MFSD6LQ8IWD5 586 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 TRMT2BQ96GJ1 504 aaKnown RBP15.41■□□□□ 0.06
COL27A1-203ENST00000468565 MYRFLQ96LU7 910 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 DDX23Q9BUQ8 820 aaKnown RBP15.41■□□□□ 0.06
COL27A1-203ENST00000468565 IRF2BPLQ9H1B7 796 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 TASP1Q9H6P5 420 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 TRPV5Q9NQA5 729 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 OBP2AQ9NY56 170 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 UXTQ9UBK9 157 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-203ENST00000468565 CACNA1HO95180 2353 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 PI15O43692 258 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 SERPINC1P01008 464 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 F11P03951 625 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 KRT13P13646 458 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
COL27A1-203ENST00000468565 NHLH1Q02575 133 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 GRM2Q14416 872 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-203ENST00000468565 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 BRD9Q9H8M2 597 aa15.41■□□□□ 0.06
COL27A1-203ENST00000468565 PATJQ8NI35 1801 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms