RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 PSMC2P35998 433 aaKnown RBP18.24■□□□□ 0.51
SSBP1-207ENST00000468267 CDH8P55286 799 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 ENPEPQ07075 957 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 UBXN2BQ14CS0 331 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 ANGPT1Q15389 498 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 EDRF1Q3B7T1 1238 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 INTS8Q75QN2 995 aaKnown RBP18.24■□□□□ 0.51
SSBP1-207ENST00000468267 MON1AQ86VX9 555 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 FAM186BQ8IYM0 893 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 CMTM8Q8IZV2 173 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 SPATA20Q8TB22 786 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
SSBP1-207ENST00000468267 TAF4BQ92750 862 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 ELMO3Q96BJ8 720 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 CEP295NLQ96MC4 621 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 DPEP3Q9H4B8 488 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 SMYD3Q9H7B4 428 aa18.24■□□□□ 0.51
SSBP1-207ENST00000468267 MAN2B1O00754 1011 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 GRIK1P39086 918 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 PRCPP42785 496 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 MLLT6P55198 1093 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 MCCD1P59942 119 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF658Q5TYW1 1059 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 TXNDC8Q6A555 127 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 CELF5Q8N6W0 485 aaKnown RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 MAB21L3Q8N8X9 362 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 B3GALNT2Q8NCR0 500 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 CIZ1Q9ULV3 898 aaPredicted RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 MRPS17Q9Y2R5 130 aaKnown RBP18.23■□□□□ 0.51
SSBP1-207ENST00000468267 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
SSBP1-207ENST00000468267 MYH10P35580 1976 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 FAM186AA6NE01 2351 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 TADA3O75528 432 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 CLSTN1O94985 981 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 ASS1P00966 412 aaKnown RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 HLA-DRAP01903 254 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 KRT13P13646 458 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 P4HA1P13674 534 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 AVPR1AP37288 418 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 ARHGAP29Q52LW3 1261 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 SCARA5Q6ZMJ2 495 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 ELOA2Q8IYF1 753 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 ZNF687Q8N1G0 1237 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 BPIFB1Q8TDL5 484 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 CSGALNACT1Q8TDX6 532 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 SMARCE1Q969G3 411 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 CLDN23Q96B33 292 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 C8orf48Q96LL4 319 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 B3GNT5Q9BYG0 378 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 BCO2Q9BYV7 579 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 SMG9Q9H0W8 520 aaKnown RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 SDCBP2Q9H190 292 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 PIAS3Q9Y6X2 628 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
SSBP1-207ENST00000468267 KIF26AQ9ULI4 1882 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-207ENST00000468267 TRIM66O15016 1216 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 NCAM2O15394 837 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 TRIM49P0CI25 452 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 TRIM49CP0CI26 452 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 ANXA13P27216 316 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 PIK3CAP42336 1068 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 MAGEA9P43362 315 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 GCLMP48507 274 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 PPP3CAQ08209 521 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 FZD5Q13467 585 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 C1orf210Q8IVY1 113 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-207ENST00000468267 USP13Q92995 863 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-207ENST00000468267 ELOVL4Q9GZR5 314 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 TDP1Q9NUW8 608 aa18.21■□□□□ 0.51
SSBP1-207ENST00000468267 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 F8VP50 259 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 CETN3O15182 167 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 GTF2H1P32780 548 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 NBL1P41271 181 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
SSBP1-207ENST00000468267 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 ZNF268Q14587 947 aaPredicted RBP18.2■□□□□ 0.5
SSBP1-207ENST00000468267 SPOPLQ6IQ16 392 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 DENND5BQ6ZUT9 1274 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 EEF2KMTQ96G04 330 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 ZFYVE19Q96K21 471 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 TNIP3Q96KP6 325 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 TTLL2Q9BWV7 592 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 ZNF518BQ9C0D4 1074 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 C8orf33Q9H7E9 229 aaPredicted RBP18.2■□□□□ 0.5
SSBP1-207ENST00000468267 TMEM30AQ9NV96 361 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 THG1LQ9NWX6 298 aaKnown RBP18.2■□□□□ 0.5
SSBP1-207ENST00000468267 EHD2Q9NZN4 543 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 CCL26Q9Y258 94 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 PATJQ8NI35 1801 aa18.2■□□□□ 0.5
SSBP1-207ENST00000468267 ZNF292O60281 2723 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 CLDN5O00501 218 aa18.19■□□□□ 0.5
SSBP1-207ENST00000468267 GADD45BO75293 160 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms