RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 H3BNC9 293 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 H7C4K7 107 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TULP2O00295 520 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 GRM6O15303 877 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ARHGAP6O43182 974 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 RTN2O75298 545 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 MICAL2O94851 1124 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CNPP09543 421 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 OR4Q2P0C623 313 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CD19P15391 556 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ANXA13P27216 316 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 PCSK1P29120 753 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 GNA15P30679 374 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 OR1D2P34982 312 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 MAGEA1P43355 309 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 GABRB2P47870 512 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 GALCP54803 685 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 PSMC1P62191 440 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 SMAD3P84022 425 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 MLLT1Q03111 559 aaPredicted RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 RAB33AQ14088 237 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CLEC16AQ2KHT3 1053 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 SGO2Q562F6 1265 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 CCDC122Q5T0U0 273 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 PMF1Q6P1K2 205 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 RNF19BQ6ZMZ0 732 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TRIM67Q6ZTA4 783 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TOGARAM2Q6ZUX3 1019 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TMEM110Q86TL2 294 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TTC30AQ86WT1 665 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TDHQ8IZJ6 230 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ATAD1Q8NBU5 361 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CCDC112Q8NEF3 446 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ZMIZ2Q8NF64 920 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 KIAA1524Q8TCG1 905 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 STK32AQ8WU08 396 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 POF1BQ8WVV4 589 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 ATRIPQ8WXE1 791 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CPA5Q8WXQ8 436 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 AUTS2Q8WXX7 1259 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 RIN2Q8WYP3 895 aaPredicted RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 TMEM169Q96HH4 297 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 PCED1BQ96HM7 432 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 KLHL5Q96PQ7 755 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TGS1Q96RS0 853 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 KCNK16Q96T55 309 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 SMOQ99835 787 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 SYT15Q9BQS2 421 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP39-213ENST00000467885 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 ZNF518BQ9C0D4 1074 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 CRISPLD1Q9H336 500 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 KCND1Q9NSA2 647 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TMEM30AQ9NV96 361 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 IL37Q9NZH6 218 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 FNIP2Q9P278 1114 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 MTRRQ9UBK8 725 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 PUF60Q9UHX1 559 aaKnown RBP6.31□□□□□ -1.4
USP39-213ENST00000467885 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP39-213ENST00000467885 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
USP39-213ENST00000467885 TCRBV5S1A1TA0A578 114 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 C2orf71A6NGG8 1288 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 HIDE1A8MVS5 230 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 RFXAPO00287 272 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 TNFRSF10BO14763 440 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 FSCN2O14926 492 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 TEX28O15482 410 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 PJA2O43164 708 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 MED7O43513 233 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 AKR1B10O60218 316 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 LPXNO60711 386 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 SEC24AO95486 1093 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 CCDC130P13994 396 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 ATF2P15336 505 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 RPL17P18621 184 aaKnown RBP6.3□□□□□ -1.4
USP39-213ENST00000467885 MMP8P22894 467 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 BDNFP23560 247 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 CYP2F1P24903 491 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 IRS1P35568 1242 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 PPM1AP35813 382 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 GLUD2P49448 558 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 NDUFV1P49821 464 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 KIF11P52732 1056 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 NOMO3P69849 1222 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 UBE3AQ05086 875 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 PDE4CQ08493 712 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 DUSP4Q13115 394 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 GPM6BQ13491 265 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 TCEAL1Q15170 157 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 STILQ15468 1287 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 PTPN14Q15678 1187 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 MDH1BQ5I0G3 518 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 C10orf76Q5T2E6 689 aa6.3□□□□□ -1.4
USP39-213ENST00000467885 KIAA1841Q6NSI8 718 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms