RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 TXNDC8Q6A555 127 aa19.35■□□□□ 0.69
CGREF1-208ENST00000467539 MAB21L3Q8N8X9 362 aa19.35■□□□□ 0.69
CGREF1-208ENST00000467539 B3GALNT2Q8NCR0 500 aa19.35■□□□□ 0.69
CGREF1-208ENST00000467539 CLDN23Q96B33 292 aa19.35■□□□□ 0.69
CGREF1-208ENST00000467539 TRIM66O15016 1216 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 CETN3O15182 167 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 NCAM2O15394 837 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 LRRN2O75325 713 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 HLA-DRAP01903 254 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 GTF2H1P32780 548 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 AVPR1AP37288 418 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 MRE11P49959 708 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 PPP3CAQ08209 521 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 FZD5Q13467 585 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 UBXN2BQ14CS0 331 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 ANGPT1Q15389 498 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 ADSSL1Q8N142 457 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 STKLD1Q8NE28 680 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 BPIFB1Q8TDL5 484 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 ELMO3Q96BJ8 720 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 TNIP3Q96KP6 325 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 PHOX2BQ99453 314 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 B3GNT5Q9BYG0 378 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 SDCBP2Q9H190 292 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 DPEP3Q9H4B8 488 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 SMYD3Q9H7B4 428 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 TDP1Q9NUW8 608 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 THG1LQ9NWX6 298 aaKnown RBP19.34■□□□□ 0.69
CGREF1-208ENST00000467539 EHD2Q9NZN4 543 aa19.34■□□□□ 0.69
CGREF1-208ENST00000467539 PRAMEF12O95522 483 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 ANXA13P27216 316 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 MAGEA9P43362 315 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 GCLMP48507 274 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 PLCB2Q00722 1185 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 ANKRD40Q6AI12 368 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 DENND5BQ6ZUT9 1274 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 C1orf210Q8IVY1 113 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 ZNF687Q8N1G0 1237 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 CRYBG2Q8N1P7 616 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 CSGALNACT1Q8TDX6 532 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.68
CGREF1-208ENST00000467539 USP13Q92995 863 aaPredicted RBP19.33■□□□□ 0.68
CGREF1-208ENST00000467539 TTLL2Q9BWV7 592 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 BCO2Q9BYV7 579 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 ELOVL4Q9GZR5 314 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 C8orf33Q9H7E9 229 aaPredicted RBP19.33■□□□□ 0.68
CGREF1-208ENST00000467539 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
CGREF1-208ENST00000467539 PROB1E7EW31 1015 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 F8VP50 259 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 KINO60870 393 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 GADD45BO75293 160 aaPredicted RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TADA3O75528 432 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TRIM49P0CI25 452 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TRIM49CP0CI26 452 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TARSP26639 723 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 RPS9P46781 194 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 RAP1GAPP47736 663 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 NOP14P78316 857 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 FKBP3Q00688 224 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 ZNF268Q14587 947 aaPredicted RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 UNC93AQ86WB7 457 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 ZC3H3Q8IXZ2 948 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 EEF2KMTQ96G04 330 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 CYP2S1Q96SQ9 504 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TSG101Q99816 390 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 SMG9Q9H0W8 520 aaKnown RBP19.32■□□□□ 0.68
CGREF1-208ENST00000467539 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 TMEM8AQ9HCN3 771 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 PIAS3Q9Y6X2 628 aa19.32■□□□□ 0.68
CGREF1-208ENST00000467539 F5P12259 2224 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 CLDN5O00501 218 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 NBL1P41271 181 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 PIK3CAP42336 1068 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 PPP3CCP48454 512 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 KRT39Q6A163 491 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 SPOPLQ6IQ16 392 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 C1orf228Q6PIY5 440 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 PAQR9Q6ZVX9 377 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 TAS1R2Q8TE23 839 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 FAM3CQ92520 227 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 MSANTD3Q96H12 275 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 ZNF518BQ9C0D4 1074 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 CYP3A43Q9HB55 503 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 GKN1Q9NS71 199 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
CGREF1-208ENST00000467539 STX10O60499 249 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 CLSTN1O94985 981 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 USP17L7P0C7H9 530 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 EPB41P11171 864 aaKnown RBP19.3■□□□□ 0.68
CGREF1-208ENST00000467539 PFKLP17858 780 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 ASPAP45381 313 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 NDST1P52848 882 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 CACNA2D1P54289 1103 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 USP46P62068 366 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 LRRC63Q05C16 580 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 SCARA5Q6ZMJ2 495 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 ACOT1Q86TX2 421 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 DHTKD1Q96HY7 919 aaPredicted RBP19.3■□□□□ 0.68
CGREF1-208ENST00000467539 FAXDC2Q96IV6 333 aa19.3■□□□□ 0.68
CGREF1-208ENST00000467539 ZFYVE19Q96K21 471 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms