RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 NOP14P78316 857 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 ADAM9Q13443 819 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 ELOA2Q8IYF1 753 aaPredicted RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 MRPS31Q92665 395 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 TAF4BQ92750 862 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 EEF2KMTQ96G04 330 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 MYRFLQ96LU7 910 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
TMCO3-205ENST00000465556 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 MMRN2Q9H8L6 949 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 FAM86C1Q9NVL1 165 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 OBP2AQ9NY56 170 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 SIT1Q9Y3P8 196 aa12.81□□□□□ -0.36
TMCO3-205ENST00000465556 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 F8VP50 259 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 H0Y858 1186 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 DPYSL4O14531 572 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 ZNF263O14978 683 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TRIM66O15016 1216 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 CETN3O15182 167 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 LRRN2O75325 713 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 DCNP07585 359 aaKnown RBP12.8□□□□□ -0.36
TMCO3-205ENST00000465556 GLULP15104 373 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 ANXA13P27216 316 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 GRIK1P39086 918 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 ASPAP45381 313 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 PMS1P54277 932 aaKnown RBP12.8□□□□□ -0.36
TMCO3-205ENST00000465556 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 FAM35AQ86V20 835 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 YAF2Q8IY57 180 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 CMTM8Q8IZV2 173 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 ADSSL1Q8N142 457 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 MAB21L3Q8N8X9 362 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TAS1R2Q8TE23 839 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 SPATA17Q96L03 361 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 CEP295NLQ96MC4 621 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 LRRC3BQ96PB8 259 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TSG101Q99816 390 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 SMG9Q9H0W8 520 aaKnown RBP12.8□□□□□ -0.36
TMCO3-205ENST00000465556 IRF2BPLQ9H1B7 796 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 KIF9Q9HAQ2 790 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TMEM8AQ9HCN3 771 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TMEM30AQ9NV96 361 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 HMGXB4Q9UGU5 601 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 MAN1B1Q9UKM7 699 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 ATP8B3O60423 1300 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 DMDP11532 3685 aa12.8□□□□□ -0.36
TMCO3-205ENST00000465556 TRIM49BA6NDI0 452 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 SHISA7A6NL88 538 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CLDN5O00501 218 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CHADO15335 359 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CD72P21854 359 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 GTF2H1P32780 548 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 AVPR1AP37288 418 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 MXI1P50539 228 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 LRRC63Q05C16 580 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 STIM1Q13586 685 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 ARHGAP29Q52LW3 1261 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 TXNDC8Q6A555 127 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 DENND5BQ6ZUT9 1274 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 MON1AQ86VX9 555 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 BPIFB1Q8TDL5 484 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 USP13Q92995 863 aaPredicted RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 C8orf48Q96LL4 319 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 TTLL2Q9BWV7 592 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 BCO2Q9BYV7 579 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 TRPC7Q9HCX4 862 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■■■ 96.1
TMCO3-205ENST00000465556 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 CCL26Q9Y258 94 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 PIAS3Q9Y6X2 628 aa12.79□□□□□ -0.36
TMCO3-205ENST00000465556 ZFHX2Q9C0A1 2572 aaPredicted RBP12.79□□□□□ -0.36
TMCO3-205ENST00000465556 SOBPA7XYQ1 873 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 PSMA7O14818 248 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 NDST1P52848 882 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 MCCD1P59942 119 aaPredicted RBP12.78□□□□□ -0.36
TMCO3-205ENST00000465556 USP46P62068 366 aa12.78□□□□□ -0.36
TMCO3-205ENST00000465556 FKBP3Q00688 224 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms