RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	USP38	Q8NB14	1042 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	OR10H5	Q8NGA6	315 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CXorf38	Q8TB03	319 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	C8orf49	Q96NF6	230 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ASB2	Q96Q27	587 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PRAM1	Q96QH2	718 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GPR87	Q9BY21	358 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TMEM60	Q9H2L4	133 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM204A	Q9H8W3	233 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	L1RE1	Q9UN81	338 aa		6.12	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CFAP69	A5D8W1	941 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PRSS29P	A6NIE9	313 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TPP1	O14773	563 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ITGB1	P05556	798 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	HDC	P19113	662 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	AGFG1	P52594	562 aa	Known RBP	6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RAB1A	P62820	205 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NOMO3	P69849	1222 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	LURAP1L	Q8IV03	231 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PALM2	Q8IXS6	379 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KIAA0319L	Q8IZA0	1049 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	BHMT2	Q9H2M3	363 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MRPL46	Q9H2W6	279 aa	Known RBP	6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	WDCP	Q9H6R7	721 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ZMAT3	Q9HA38	289 aa	Known RBP	6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	JAG2	Q9Y219	1238 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PCDHGB6	Q9Y5F9	930 aa		6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TPR	P12270	2363 aa	Known RBP	6.11	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CAPN8	A6NHC0	703 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SMIM22	K7EJ46	135 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	POLRMT	O00411	1230 aa	Known RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SLC43A1	O75387	559 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	AGFG2	O95081	481 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KIT	P10721	976 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FOSL2	P15408	326 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	EPS15	P42566	896 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NHLH2	Q02577	135 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CRHR2	Q13324	411 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CNGB1	Q14028	1251 aa	Predicted RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RRP1B	Q14684	758 aa	Known RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CNN3	Q15417	329 aa	Known RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CCDC93	Q567U6	631 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RNF220	Q5VTB9	566 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TSHZ3	Q63HK5	1081 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SWSAP1	Q6NVH7	229 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM90A1	Q86YD7	464 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FITM2	Q8N6M3	262 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TBC1D15	Q8TC07	691 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FAM167A	Q96KS9	214 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	APOL5	Q9BWW9	433 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PACSIN1	Q9BY11	444 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KLC2	Q9H0B6	622 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	BRD9	Q9H8M2	597 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SARS2	Q9NP81	518 aa	Known RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SMPD4	Q9NXE4	827 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CLCA2	Q9UQC9	943 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	TCAF1	Q9Y4C2	921 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MAP1B	P46821	2468 aa	Known RBP	6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	LRRC37A2	A6NM11	1700 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SCN7A	Q01118	1682 aa		6.1	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ZSWIM8	A7E2V4	1837 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ADGRF5	Q8IZF2	1346 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	KLRG2	A4D1S0	409 aa	Predicted RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CDHR4	A6H8M9	788 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RHCE	P18577	417 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	APOBEC3A	P31941	199 aa	Predicted RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MAN2A2	P49641	1150 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PSMC1	P62191	440 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RHD	Q02161	417 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DRICH1	Q6PGQ1	229 aa	Predicted RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	DARS2	Q6PI48	645 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MAEA	Q7L5Y9	396 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SRGAP1	Q7Z6B7	1085 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RASAL3	Q86YV0	1011 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	CCDC146	Q8IYE0	955 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	PCSK9	Q8NBP7	692 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	EDA	Q92838	391 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	MTFMT	Q96DP5	389 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	RSAD1	Q9HA92	442 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ATP6V0A4	Q9HBG4	840 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	ARNT2	Q9HBZ2	717 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	GNL3L	Q9NVN8	582 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	EIF2B4	Q9UI10	523 aa	Known RBP	6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	SORCS3	Q9UPU3	1222 aa		6.09	□□□□□ -1.43
CACNA1C-223	ENST00000465278	FLNB	O75369	2602 aa	Known RBP	6.09	□□□□□ -1.44
CACNA1C-223	ENST00000465278	PLXNA3	P51805	1871 aa		6.09	□□□□□ -1.44
CACNA1C-223	ENST00000465278	GOLGA6L6	A8MZA4	724 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	FAM227A	F5H4B4	570 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	APAF1	O14727	1248 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	ZNF185	O15231	689 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	MAP4K4	O95819	1239 aa	Predicted RBP	6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	ZBED1	O96006	694 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	GJB1	P08034	283 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	FTH1P19	P0C7X4	201 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	ALAS1	P13196	640 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	MGAT1	P26572	445 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	IL12RB1	P42701	662 aa		6.08	□□□□□ -1.44
CACNA1C-223	ENST00000465278	PIK3CG	P48736	1102 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms