RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TASP1Q9H6P5 420 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 ZFP14Q9HCL3 533 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 TECTAO75443 2155 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 GREB1Q4ZG55 1949 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 A0A1W2PRU2 124 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 CILPO75339 1184 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 BDNFP23560 247 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 PFKPQ01813 784 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 FAM78AQ5JUQ0 283 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 SCN4BQ8IWT1 228 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 GPT2Q8TD30 523 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 FGF14Q92915 247 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 ATXN3LQ9H3M9 355 aa13.9□□□□□ -0.18
R3HDM1-213ENST00000463230 OBSL1O75147 1896 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 F11P03951 625 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 FCARP24071 287 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 GRIK1P39086 918 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 PDE6CP51160 858 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 STX17P56962 302 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 DDR2Q16832 855 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 THAP9Q9H5L6 903 aa13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
R3HDM1-213ENST00000463230 RTN3O95197 1032 aaPredicted RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 KCNV2Q8TDN2 545 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 RSAD2Q8WXG1 361 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 KCNH6Q9H252 994 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 NCANO14594 1321 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 AFPP02771 609 aaKnown RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 GPR15P49685 360 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 CCDC142Q17RM4 750 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 GPR158Q5T848 1215 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 DENND5BQ6ZUT9 1274 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 ACOT1Q86TX2 421 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 DNASE1L2Q92874 299 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 HNRNPABQ99729 332 aaKnown RBP13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 MED10Q9BTT4 135 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 ZNF518BQ9C0D4 1074 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 SLITRK6Q9H5Y7 841 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 TRPV5Q9NQA5 729 aa13.88□□□□□ -0.19
R3HDM1-213ENST00000463230 FAM86C2PA6NEL3 165 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 CUL2Q13617 745 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 ZNF268Q14587 947 aaPredicted RBP13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 GSE1Q14687 1217 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 TMEM150AQ86TG1 271 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 FBXL6Q8N531 539 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 FAM81BQ96LP2 452 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 NT5C1BQ96P26 610 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 KXD1Q9BQD3 176 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 CSNK1G1Q9HCP0 422 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 PNPLA8Q9NP80 782 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 ARIH1Q9Y4X5 557 aaPredicted RBP13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 PATJQ8NI35 1801 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 F8VP50 259 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 DPCR1Q3MIW9 517 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 TANGO2Q6ICL3 276 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 MFSD6LQ8IWD5 586 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 KIAA1958Q8N8K9 716 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 SHDQ96IW2 340 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 ZSWIM3Q96MP5 696 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
R3HDM1-213ENST00000463230 GTPBP10A4D1E9 387 aaKnown RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 NARSO43776 548 aaKnown RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 GJA1P17302 382 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PSMC3P17980 439 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PRKCQQ04759 706 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PHLDB3Q6NSJ2 640 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 POTEHQ6S545 545 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 PAQR9Q6ZVX9 377 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 NUP93Q8N1F7 819 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 MED15Q96RN5 788 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 IL37Q9NZH6 218 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 HMGXB4Q9UGU5 601 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 KIAA1257Q9ULG3 409 aa13.86□□□□□ -0.19
R3HDM1-213ENST00000463230 MAGED2Q9UNF1 606 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms