RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 JAM2P57087 298 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 RPL10AP62906 217 aaKnown RBP12.51□□□□□ -0.41
CPNE1-221ENST00000462352 LEXMQ3ZCV2 418 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 TFAP2BQ92481 460 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 SMG7Q92540 1137 aaKnown RBP12.51□□□□□ -0.41
CPNE1-221ENST00000462352 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 ZSWIM1Q9BR11 485 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 KRT82Q9NSB4 513 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 THEGQ9P2T0 379 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 XIRP2A4UGR9 3374 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 PTPRDP23468 1912 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 F8VP50 259 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 O00370 1275 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 TRIM66O15016 1216 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 CYP26A1O43174 497 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 MBTPS2O43462 519 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 AP1G2O75843 785 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 FAM200BP0CF97 657 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 BRD2P25440 801 aaKnown RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GNA15P30679 374 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 CLCN1P35523 988 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 VEPH1Q14D04 833 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 ATAT1Q5SQI0 421 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 CACNA2D4Q7Z3S7 1137 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GPR152Q8TDT2 470 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 PSMG2Q969U7 264 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 C8orf48Q96LL4 319 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 ZNF512Q96ME7 567 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 SMOQ99835 787 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 CSNK1G1Q9HCP0 422 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 DMAP1Q9NPF5 467 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 TSPAN16Q9UKR8 245 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 USP15Q9Y4E8 981 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-221ENST00000462352 ASB3Q9Y575 518 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 COL6A3P12111 3177 aa12.5□□□□□ -0.41
CPNE1-221ENST00000462352 BEST1O76090 585 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 NPR3P17342 541 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 PTPN2P17706 415 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ANXA13P27216 316 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 STAT1P42224 750 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 PTK2Q05397 1052 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 STILQ15468 1287 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 CNGA2Q16280 664 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 FIGNQ5HY92 759 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 LCLAT1Q6UWP7 414 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-221ENST00000462352 DNAJB7Q7Z6W7 309 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ITIH5Q86UX2 942 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 SLC47A2Q86VL8 602 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 TTC30AQ86WT1 665 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ANKRD52Q8NB46 1076 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ZNF606Q8WXB4 792 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 SUSD6Q92537 303 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 SPATA17Q96L03 361 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 CEP295NLQ96MC4 621 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 CORO1BQ9BR76 489 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 DUSP16Q9BY84 665 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 TRIM5Q9C035 493 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 TTYH3Q9C0H2 523 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 HCFC1R1Q9NWW0 138 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 HESX1Q9UBX0 185 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CPNE1-221ENST00000462352 PRUNE2Q8WUY3 3088 aa12.49□□□□□ -0.41
CPNE1-221ENST00000462352 ITIH6Q6UXX5 1313 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 SLC38A8A6NNN8 435 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 THAP12O43422 761 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 GFPT2O94808 682 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 RHOP08100 348 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 CSH1P0DML2 217 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 CSH2P0DML3 217 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 SOX5P35711 763 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 MTHFRP42898 656 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 BPIFB4P59827 614 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 NTHL1P78549 312 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 CBX2Q14781 532 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-221ENST00000462352 TAF12Q16514 161 aa12.48□□□□□ -0.41
CPNE1-221ENST00000462352 AAK1Q2M2I8 961 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms