RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZCWPW1Q9H0M4 648 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 FAM83DQ9H4H8 585 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 PPCSQ9HAB8 311 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 XPNPEP3Q9NQH7 507 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 RNF181Q9P0P0 153 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 ATP11BQ9Y2G3 1177 aa4.54□□□□□ -1.68
CLK1-206ENST00000461326 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.54□□□□□ -1.68
CLK1-206ENST00000461326 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 AQP7P3A6NL99 342 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 E9PLN8 166 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 POLRMTO00411 1230 aaKnown RBP4.53□□□□□ -1.68
CLK1-206ENST00000461326 FCER1AP12319 257 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 HK1P19367 917 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 ACVR2AP27037 513 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 LRPAP1P30533 357 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CCT5P48643 541 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 ALDH9A1P49189 494 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 COPAP53621 1224 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 MGAT5BQ3V5L5 792 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 TIGD2Q4W5G0 525 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 NOMO2Q5JPE7 1267 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 FAM102AQ5T9C2 384 aaPredicted RBP4.53□□□□□ -1.68
CLK1-206ENST00000461326 KLHDC7AQ5VTJ3 777 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 C1QL3Q5VWW1 255 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 ARL6IP4Q66PJ3 421 aaKnown RBP4.53□□□□□ -1.68
CLK1-206ENST00000461326 TAPT1Q6NXT6 567 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 TLDC1Q6P9B6 456 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 FBXO38Q6PIJ6 1188 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 FOXR2Q6PJQ5 311 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 KRT28Q7Z3Y7 464 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CPXCR1Q8N123 301 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CFAP52Q8N1V2 620 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 VGLL2Q8N8G2 317 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 OR56A3Q8NH54 315 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CCT6BQ92526 530 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 TRIM63Q969Q1 353 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 SCLT1Q96NL6 688 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 TRIB1Q96RU8 372 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 VKORC1Q9BQB6 163 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 ISCA1Q9BUE6 129 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 STK31Q9BXU1 1019 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 MS4A7Q9GZW8 240 aaPredicted RBP4.53□□□□□ -1.68
CLK1-206ENST00000461326 CHST8Q9H2A9 424 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 SYNPO2LQ9H987 977 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 HEYLQ9NQ87 328 aaPredicted RBP4.53□□□□□ -1.68
CLK1-206ENST00000461326 ETAA1Q9NY74 926 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CDC23Q9UJX2 597 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 ITGB1BP2Q9UKP3 347 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 HDAC9Q9UKV0 1011 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 CDYLQ9Y232 598 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 HS3ST4Q9Y661 456 aa4.53□□□□□ -1.68
CLK1-206ENST00000461326 GAGE12BA1L429 117 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 NBNO60934 754 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 KIF20AO95235 890 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 HLA-DOAP06340 250 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 NR4A1P22736 598 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 HALP42357 657 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 NHLH2Q02577 135 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 TRIM14Q14142 442 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 ARHGEF7Q14155 803 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 SLC29A2Q14542 456 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 PUM3Q15397 648 aaKnown RBP4.52□□□□□ -1.69
CLK1-206ENST00000461326 MZT2AQ6P582 158 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 LAYNQ6UX15 382 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 SYT12Q8IV01 421 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 SMAP1Q8IYB5 467 aaPredicted RBP4.52□□□□□ -1.69
CLK1-206ENST00000461326 BEND2Q8NDZ0 799 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 MYRIPQ8NFW9 859 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 OR56A1Q8NGH5 318 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 POC1BQ8TC44 478 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 NELL1Q92832 810 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 ZNF668Q96K58 619 aaPredicted RBP4.52□□□□□ -1.69
CLK1-206ENST00000461326 PHACTR3Q96KR7 559 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 MESP1Q9BRJ9 268 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 TLR10Q9BXR5 811 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 TMEM8AQ9HCN3 771 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 MID2Q9UJV3 735 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 CAPN11Q9UMQ6 739 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 AGAP1Q9UPQ3 857 aa4.52□□□□□ -1.69
CLK1-206ENST00000461326 MORC2Q9Y6X9 1032 aaPredicted RBP4.52□□□□□ -1.69
CLK1-206ENST00000461326 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SPATA31A6Q5VVP1 1343 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SPATA31A3Q5VYP0 1347 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 A0A1B0GTW7 788 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SYT5O00445 386 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 TLR5O60602 858 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
CLK1-206ENST00000461326 A1BGP04217 495 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 KCNA2P16389 499 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 ITGALP20701 1170 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 PPIFP30405 207 aaKnown RBP4.51□□□□□ -1.69
CLK1-206ENST00000461326 CPT1AP50416 773 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 PTTG1IPP53801 180 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 FOXO1Q12778 655 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 ZACNQ401N2 412 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 CCDC38Q502W7 563 aa4.51□□□□□ -1.69
CLK1-206ENST00000461326 SFRP4Q6FHJ7 346 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms