RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 DIS3LQ8TF46 1054 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 SCAMP4Q969E2 229 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 GJA10Q969M2 543 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC35A4Q96G79 324 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TRIB1Q96RU8 372 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 HERPUD2Q9BSE4 406 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 SELENOOQ9BVL4 669 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 C1orf43Q9BWL3 253 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 ARMT1Q9H993 441 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 SARS2Q9NP81 518 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 PLCB1Q9NQ66 1216 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CNNM1Q9NRU3 951 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CTTNBP2NLQ9P2B4 639 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TBC1D30Q9Y2I9 924 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 STXBP5LQ9Y2K9 1186 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CTNND1O60716 968 aaKnown RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SUN1O94901 812 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 CHEK2O96017 543 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 ALDH2P05091 517 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 IGKV2-30P06310 120 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 HNRNPCP07910 306 aaKnown RBP eCLIP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 RARBP10826 455 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 LPOP22079 712 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 CERS1P27544 350 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 KCNJ5P48544 419 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 CCT4P50991 539 aaKnown RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 PLCD1P51178 756 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 CHAF1AQ13111 956 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 STK3Q13188 491 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 PLS1Q14651 629 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 GRM3Q14832 879 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 ALFQ53S48 1182 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM83BQ5T0W9 1011 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF626Q68DY1 528 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC9A4Q6AI14 798 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC30A10Q6XR72 485 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 EPM2AIP1Q7L775 607 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SRGAP1Q7Z6B7 1085 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 DAAM2Q86T65 1068 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM90A1Q86YD7 464 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 MYLK4Q86YV6 388 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 DENND1CQ8IV53 801 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM186BQ8IYM0 893 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 TEX19Q8NA77 164 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 PCSK9Q8NBP7 692 aaKnown RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 DENND1AQ8TEH3 1009 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 CGRRF1Q99675 332 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 MYD88Q99836 296 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 MRPL46Q9H2W6 279 aaKnown RBP4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 PTPRHQ9HD43 1115 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 EHD3Q9NZN3 535 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 SWAP70Q9UH65 585 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 ZDHHC8Q9ULC8 765 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 GTF2A1LQ9UNN4 478 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 LZTS1Q9Y250 596 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 AOX1Q06278 1338 aa4.35□□□□□ -1.71
SPTLC1-203ENST00000461132 APAF1O14727 1248 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 PMM2O15305 246 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 VPS4BO75351 444 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 NXPH3O95157 252 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 AHSGP02765 367 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ELFN1P0C7U0 828 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ZFXP17010 805 aaPredicted RBP4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 POU6F2P78424 691 aaPredicted RBP4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 MC2RQ01718 297 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 BIRC3Q13489 604 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 KIF22Q14807 665 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 KHDC1LQ5JSQ8 128 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 CEP85Q6P2H3 762 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 TOGARAM2Q6ZUX3 1019 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 PPP1R3BQ86XI6 285 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 KLHDC4Q8TBB5 520 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC35G2Q8TBE7 412 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 FKBP10Q96AY3 582 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ZBTB9Q96C00 473 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 CNPPD1Q9BV87 410 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 TMX4Q9H1E5 349 aaPredicted RBP4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 BHMT2Q9H2M3 363 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ZHX3Q9H4I2 956 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 CPA4Q9UI42 421 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ADAM21Q9UKJ8 722 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 PHTF1Q9UMS5 762 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF521Q96K83 1311 aa4.34□□□□□ -1.71
SPTLC1-203ENST00000461132 ADGRA2Q96PE1 1338 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 TARM1B6A8C7 271 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 M0QYG6 137 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 SOAT2O75908 522 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 JTBO76095 146 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 SETSIPP0DME0 302 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 ITGALP20701 1170 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 DRD4P21917 467 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 HTR1BP28222 390 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 EPHB2P29323 1055 aa4.33□□□□□ -1.72
SPTLC1-203ENST00000461132 MAN1A1P33908 653 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms