RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IFIT1P09914 478 aaKnown RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 IDEP14735 1019 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 EGR1P18146 543 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 ACRV1P26436 265 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 RAP2BP61225 183 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 MXRA7P84157 204 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 HGFACQ04756 655 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 ABHD18Q0P651 414 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 FAM110CQ1W6H9 321 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 LSM12Q3MHD2 195 aaKnown RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 GAGE13Q4V321 117 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 UTP14CQ5TAP6 766 aaKnown RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 ANKRD45Q5TZF3 282 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 RAP1GAP2Q684P5 730 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 CRTC1Q6UUV9 634 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 KRT28Q7Z3Y7 464 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 USP37Q86T82 979 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 GSPT2Q8IYD1 628 aaKnown RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 GPR135Q8IZ08 494 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 NLGN4YQ8NFZ3 816 aaPredicted RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 OR1N1Q8NGS0 311 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 OTUD7AQ8TE49 926 aaPredicted RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 ZNF384Q8TF68 577 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 SCAND2PQ9GZW5 306 aaPredicted RBP3.42□□□□□ -1.86
HPS3-203ENST00000460822 PCDHAC1Q9H158 963 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 MLXIPQ9HAP2 919 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 GPR35Q9HC97 309 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 SAYSD1Q9NPB0 183 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 RIC8AQ9NPQ8 531 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 RASSF1Q9NS23 344 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 KIF17Q9P2E2 1029 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 XPR1Q9UBH6 696 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 HS3ST4Q9Y661 456 aa3.42□□□□□ -1.86
HPS3-203ENST00000460822 PNPLA7Q6ZV29 1317 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 NPIPB8E9PQR5 432 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 H7C4K7 107 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 SOAT2O75908 522 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 USP1O94782 785 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 SNRPA1P09661 255 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 CKBP12277 381 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ATP1A3P13637 1013 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 JUPP14923 745 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 BTF3P20290 206 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 CAPN3P20807 821 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ACVR2AP27037 513 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 MCM7P33993 719 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 KRT9P35527 623 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 PRKAA2P54646 552 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 EIF5P55010 431 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 ADAM8P78325 824 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 SLC29A2Q14542 456 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TOMM20Q15388 145 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 MAPKAPK3Q16644 382 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ADCK5Q3MIX3 580 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 MIIPQ5JXC2 388 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TMTC4Q5T4D3 741 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 VPS53Q5VIR6 699 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ARL6IP4Q66PJ3 421 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 ANKS6Q68DC2 871 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 KIAA0408Q6ZU52 694 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TBC1D1Q86TI0 1168 aaPredicted RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 CPOQ8IVL8 374 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 CCDC28AQ8IWP9 274 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 FTSJ3Q8IY81 847 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 CMTM4Q8IZR5 234 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 Q8N1X5 172 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 AOPEPQ8N6M6 819 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 FAM46DQ8NEK8 389 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TMIEQ8NEW7 156 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 SPPL3Q8TCT6 385 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 PPP1R9BQ96SB3 815 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 GPHA2Q96T91 129 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TCF25Q9BQ70 676 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 OSBPL5Q9H0X9 879 aaPredicted RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 EPC1Q9H2F5 836 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 GSTO2Q9H4Y5 243 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 TMEM8AQ9HCN3 771 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ALG13Q9NP73 1137 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 UBN1Q9NPG3 1134 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 WASH6PQ9NQA3 447 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 MRPS18AQ9NVS2 196 aaKnown RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 FBXO34Q9NWN3 711 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 FEM1BQ9UK73 627 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 ZMYND8Q9ULU4 1186 aaPredicted RBP3.41□□□□□ -1.86
HPS3-203ENST00000460822 RABGAP1Q9Y3P9 1069 aa3.41□□□□□ -1.86
HPS3-203ENST00000460822 LOC102723971A0A1B0GUV8 181 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 CCER2I3L3R5 266 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 HOXC11O43248 304 aaPredicted RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 KCNQ3O43525 872 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 AGFG2O95081 481 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 ZNF202O95125 648 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 KIF20AO95235 890 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 ALAS1P13196 640 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 PECAM1P16284 738 aaPredicted RBP3.4□□□□□ -1.86
HPS3-203ENST00000460822 XBP1P17861 261 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 ELF1P32519 619 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 ACVRL1P37023 503 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 LIFRP42702 1097 aa3.4□□□□□ -1.86
HPS3-203ENST00000460822 CPT1AP50416 773 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms