RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 DNAJB7Q7Z6W7 309 aaPredicted RBP11.53□□□□□ -0.56
CCDC12-204ENST00000460035 ITIH5Q86UX2 942 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 SLC4A11Q8NBS3 891 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 SLC2A14Q8TDB8 520 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 SIX2Q9NPC8 291 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
CCDC12-204ENST00000460035 CEP72Q9P209 647 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 ASB3Q9Y575 518 aa11.53□□□□□ -0.56
CCDC12-204ENST00000460035 C5orf42Q9H799 3197 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 F8VP50 259 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 TRIM66O15016 1216 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 TEX33O43247 280 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 AP1G2O75843 785 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 RHOP08100 348 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 MYL4P12829 197 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 BMP1P13497 986 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 ATF6P18850 670 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 RFX1P22670 979 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 FSHRP23945 695 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 UBASH3AP57075 661 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 SGO2Q562F6 1265 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 PPP1R26Q5T8A7 1209 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 PAQR9Q6ZVX9 377 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 FAM35AQ86V20 835 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 FUKQ8N0W3 1084 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 NEK11Q8NG66 645 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 SMARCD1Q96GM5 515 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 CEP295NLQ96MC4 621 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 NAP1L5Q96NT1 182 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 POMKQ9H5K3 350 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 WDR6Q9NNW5 1121 aaKnown RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 PLCB1Q9NQ66 1216 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 KRT82Q9NSB4 513 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 FAM207AQ9NSI2 230 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 KIAA1257Q9ULG3 409 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 CNTN6Q9UQ52 1028 aa11.52□□□□□ -0.57
CCDC12-204ENST00000460035 MRPS23Q9Y3D9 190 aaKnown RBP11.52□□□□□ -0.57
CCDC12-204ENST00000460035 KIF26AQ9ULI4 1882 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 SLC38A8A6NNN8 435 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 FOXN3O00409 490 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 CALCAP01258 141 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 PAEPP09466 180 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 VDRP11473 427 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 UCHL3P15374 230 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 SP100P23497 879 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 GBP2P32456 591 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 ZNF132P52740 706 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 CACNA2D1P54289 1103 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 MAP3K7CLP57077 242 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 MTMR3Q13615 1198 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 DRAP1Q14919 205 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 PTPN21Q16825 1174 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 SHC3Q92529 594 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 C8orf48Q96LL4 319 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 KCNK16Q96T55 309 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 PHF7Q9BWX1 381 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 NLRC4Q9NPP4 1024 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 ASAH2Q9NR71 780 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 HESX1Q9UBX0 185 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 AJAP1Q9UKB5 411 aaPredicted RBP11.51□□□□□ -0.57
CCDC12-204ENST00000460035 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 DAAM1Q9Y4D1 1078 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 FHOD1Q9Y613 1164 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 CLUHO75153 1309 aa11.51□□□□□ -0.57
CCDC12-204ENST00000460035 ZNF197O14709 1029 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 CYP26A1O43174 497 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 CSH1P0DML2 217 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 CSH2P0DML3 217 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
CCDC12-204ENST00000460035 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-204ENST00000460035 EPHA5P54756 1037 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 SLC8A3P57103 927 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 IFRD2Q12894 506 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-204ENST00000460035 NR1I3Q14994 352 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 GOLGA7BQ2TAP0 167 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 ARHGAP17Q68EM7 881 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 GET4Q7L5D6 327 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-204ENST00000460035 LEMD2Q8NC56 503 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 UBA3Q8TBC4 463 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 TFAP2BQ92481 460 aa11.5□□□□□ -0.57
CCDC12-204ENST00000460035 PSMG2Q969U7 264 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms