RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 SCFD1Q8WVM8 642 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 SLC7A3Q8WY07 619 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 RIN2Q8WYP3 895 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 MYH2Q9UKX2 1941 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 PLIN4Q96Q06 1357 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 SNTNA6NMZ2 147 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 CAND2O75155 1236 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 LCA5LO95447 670 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 GJA8P48165 433 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 ATP2C1P98194 919 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 KLHL12Q53G59 568 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 RBM43Q6ZSC3 357 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 IKBIPQ70UQ0 350 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 METTL16Q86W50 562 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 PHF21AQ96BD5 680 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 STK33Q9BYT3 514 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 CLEC4MQ9H2X3 399 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 EFCAB1Q9HAE3 211 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 CPSF3Q9UKF6 684 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 SNED1Q8TER0 1413 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 A0A087WXM4 84 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 PDXKO00764 312 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 DRAP1Q14919 205 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 LVRNQ6Q4G3 990 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 RAD9BQ6WBX8 426 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ZNF786Q8N393 782 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 NOA1Q8NC60 698 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 MCRS1Q96EZ8 462 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 PNKPQ96T60 521 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 WHRNQ9P202 907 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 KLHL8Q9P2G9 620 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 NEU2Q9Y3R4 380 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 LRRIQ4A6NIV6 560 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CA12O43570 354 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 NBNO60934 754 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CAPN1P07384 714 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ENO3P13929 434 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 CCND2P30279 289 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 MAGEA4P43358 317 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SNAP25P60880 206 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 MTF1Q14872 753 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 LONRF1Q17RB8 773 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 TRIM71Q2Q1W2 868 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 CATSPERGQ6ZRH7 1159 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ADSSL1Q8N142 457 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 GALNT4Q8N4A0 578 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 C17orf50Q8WW18 174 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 TADA1Q96BN2 335 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 FAM20AQ96MK3 541 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 DNAJC18Q9H819 358 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 HPS5Q9UPZ3 1129 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 POTECB2RU33 542 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CNTFP26441 200 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 PLOD1Q02809 727 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 FCHO2Q0JRZ9 810 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 COASYQ13057 564 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 OASLQ15646 514 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 DGUOKQ16854 277 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 LRRC36Q1X8D7 754 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 RSBN1Q5VWQ0 802 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 MFSD14CQ5VZR4 134 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SHC4Q6S5L8 630 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ZNF554Q86TJ5 538 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ZCCHC7Q8N3Z6 543 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 SKA2Q8WVK7 121 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 GLG1Q92896 1179 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 NMD3Q96D46 503 aaKnown RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 CNDP1Q96KN2 507 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SLC13A1Q9BZW2 595 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 C20orf96Q9NUD7 363 aaPredicted RBP10.15□□□□□ -0.78
UFD1-205ENST00000459854 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 CIDEBQ9UHD4 219 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SLC24A2Q9UI40 661 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 SOX13Q9UN79 622 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 KIF13BQ9NQT8 1826 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
UFD1-205ENST00000459854 ASB14A6NK59 587 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 ICAM1P05362 532 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 LDLRAD1Q5T700 205 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 MIS18BP1Q6P0N0 1132 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 RFX8Q6ZV50 586 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 CCNJLQ8IV13 435 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 RAET1EQ8TD07 263 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 ACTRT1Q8TDG2 376 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 NSUN6Q8TEA1 469 aaKnown RBP10.15□□□□□ -0.79
UFD1-205ENST00000459854 ERGIC2Q96RQ1 377 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 ZNF184Q99676 751 aaPredicted RBP10.15□□□□□ -0.79
UFD1-205ENST00000459854 APOL6Q9BWW8 343 aa10.15□□□□□ -0.79
UFD1-205ENST00000459854 LRRC4Q9HBW1 653 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms