RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZBTB44Q8NCP5 570 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 ST13P5Q8NFI4 369 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-228ENST00000459788 GIPC2Q8TF65 315 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 CCDC127Q96BQ5 260 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 RSPRY1Q96DX4 576 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 MMS19Q96T76 1030 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 FAM83CQ9BQN1 747 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 TTLL2Q9BWV7 592 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 ELOVL4Q9GZR5 314 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-228ENST00000459788 XYLT2Q9H1B5 865 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 SNX25Q9H3E2 840 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 FAM124BQ9H5Z6 455 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-228ENST00000459788 CRTAC1Q9NQ79 661 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 COMMD8Q9NX08 183 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 ZSCAN32Q9NX65 697 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 FRMD4BQ9Y2L6 1034 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 MTF2Q9Y483 593 aaPredicted RBP10.69□□□□□ -0.7
HDLBP-228ENST00000459788 KIAA1549LQ6ZVL6 1849 aa10.69□□□□□ -0.7
HDLBP-228ENST00000459788 CEP250Q9BV73 2442 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 MYO16Q9Y6X6 1858 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 NCANO14594 1321 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 KINO60870 393 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 LILRB5O75023 590 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 PHACTR2O75167 634 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 C4BPAP04003 597 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 NR3C1P04150 777 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 USP17L7P0C7H9 530 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 CHRNB1P11230 501 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 TRIM21P19474 475 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ACAT1P24752 427 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ANXA13P27216 316 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 CASP1P29466 404 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 HOXA6P31267 233 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 CTHP32929 405 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 NDUFA8P51970 172 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 KPNA1P52294 538 aaPredicted RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 CYP4F8P98187 520 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 FAM160A1Q05DH4 1040 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 PDGFRLQ15198 375 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 DDR2Q16832 855 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ZACNQ401N2 412 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 COBLL1Q53SF7 1204 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ZNF667Q5HYK9 610 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 STXBP5Q5T5C0 1151 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 DENND5BQ6ZUT9 1274 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 INTS8Q75QN2 995 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ASCL5Q7RTU5 278 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 UNC93AQ86WB7 457 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 SPEM1Q8N4L4 309 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 GPR161Q8N6U8 529 aaKnown RBP10.68□□□□□ -0.7
HDLBP-228ENST00000459788 RDH13Q8NBN7 331 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 OVCA2Q8WZ82 227 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 MYLPFQ96A32 169 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 TNIP3Q96KP6 325 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 DNAI2Q9GZS0 605 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 COL4A3Q01955 1670 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 FRYLO94915 3013 aa10.68□□□□□ -0.7
HDLBP-228ENST00000459788 CACNA1AO00555 2505 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ATG2BQ96BY7 2078 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 TRAV19A0A0A6YYK7 116 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 LRRIQ3A6PVS8 624 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 SPECC1L-ADORA2AF8WAN1 911 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ZNF202O95125 648 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 RTN3O95197 1032 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 PRAMEF12O95522 483 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 PTPN1P18031 435 aaKnown RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 CD72P21854 359 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 LMO2P25791 158 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 GTF2H1P32780 548 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 CNR2P34972 360 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 GRIK1P39086 918 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 MYL6P60660 151 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 NCOA4Q13772 614 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ZNF699Q32M78 642 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 EDRF1Q3B7T1 1238 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 TDRD10Q5VZ19 366 aaKnown RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 CC2D1AQ6P1N0 951 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ELOA2Q8IYF1 753 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 GRAMD1CQ8IYS0 662 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 TTC39CQ8N584 583 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 MAB21L3Q8N8X9 362 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 B3GALNT2Q8NCR0 500 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 PDZD8Q8NEN9 1154 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 CCDC26Q8TAB7 109 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ATRIPQ8WXE1 791 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 USP13Q92995 863 aaPredicted RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 PCED1BQ96HM7 432 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
HDLBP-228ENST00000459788 LMAN1LQ9HAT1 526 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 RMND1Q9NWS8 449 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 TRPM5Q9NZQ8 1165 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 ARHGAP26Q9UNA1 814 aa10.67□□□□□ -0.7
HDLBP-228ENST00000459788 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 A8MXQ7 604 aa10.66□□□□□ -0.7
HDLBP-228ENST00000459788 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms