RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
COL7A1-203ENST00000459756 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 ASS1P00966 412 aaKnown RBP17.18■□□□□ 0.34
COL7A1-203ENST00000459756 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 GLULP15104 373 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 ANXA13P27216 316 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 AVPR1AP37288 418 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 MLLT6P55198 1093 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-203ENST00000459756 CDH8P55286 799 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 MCCD1P59942 119 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-203ENST00000459756 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 MON1AQ86VX9 555 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 GPIHBP1Q8IV16 184 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 CELF5Q8N6W0 485 aaKnown RBP17.18■□□□□ 0.34
COL7A1-203ENST00000459756 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 CSGALNACT1Q8TDX6 532 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 TNIP3Q96KP6 325 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 LRRC3BQ96PB8 259 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 TSG101Q99816 390 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 ELOVL4Q9GZR5 314 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 EHD2Q9NZN4 543 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 COL4A2P08572 1712 aa17.18■□□□□ 0.34
COL7A1-203ENST00000459756 COL4A3Q01955 1670 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 NCAM2O15394 837 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 TRIM49P0CI25 452 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 TRIM49CP0CI26 452 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 EPB41P11171 864 aaKnown RBP17.17■□□□□ 0.34
COL7A1-203ENST00000459756 CD72P21854 359 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 GTF2H1P32780 548 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 MAGEA9P43362 315 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 GCLMP48507 274 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 ANGPT1Q15389 498 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 TXNDC8Q6A555 127 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 SCARA5Q6ZMJ2 495 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 DENND5BQ6ZUT9 1274 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 BPIFB1Q8TDL5 484 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 MSANTD3Q96H12 275 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 C8orf48Q96LL4 319 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 BCO2Q9BYV7 579 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 SDCBP2Q9H190 292 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 KIF9Q9HAQ2 790 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 THG1LQ9NWX6 298 aaKnown RBP17.17■□□□□ 0.34
COL7A1-203ENST00000459756 MTF2Q9Y483 593 aaPredicted RBP17.17■□□□□ 0.34
COL7A1-203ENST00000459756 PIAS3Q9Y6X2 628 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 GREB1Q4ZG55 1949 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
COL7A1-203ENST00000459756 TADA3O75528 432 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 RAP1GAPP47736 663 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 MRE11P49959 708 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 NOP14P78316 857 aaKnown RBP17.16■□□□□ 0.34
COL7A1-203ENST00000459756 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 LRRC63Q05C16 580 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 C1orf228Q6PIY5 440 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 ERCC4Q92889 916 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-203ENST00000459756 CLDN23Q96B33 292 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 ELMO3Q96BJ8 720 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 PHOX2BQ99453 314 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 B3GNT5Q9BYG0 378 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 SMG9Q9H0W8 520 aaKnown RBP17.16■□□□□ 0.34
COL7A1-203ENST00000459756 TMEM8AQ9HCN3 771 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 TDP1Q9NUW8 608 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 FAM86C1Q9NVL1 165 aa17.16■□□□□ 0.34
COL7A1-203ENST00000459756 ZNF638Q14966 1978 aaKnown RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 VPS13AQ96RL7 3174 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 F5P12259 2224 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 F8VP50 259 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 STX10O60499 249 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 LRRN2O75325 713 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 TARSP26639 723 aaKnown RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 ASPAP45381 313 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 FKBP3Q00688 224 aaKnown RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 STIM1Q13586 685 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 ZNF268Q14587 947 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 ALYREFQ86V81 257 aaKnown RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 UNC93AQ86WB7 457 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 C1orf210Q8IVY1 113 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 ADSSL1Q8N142 457 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 EEF2KMTQ96G04 330 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 TTLL2Q9BWV7 592 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 ZNF518BQ9C0D4 1074 aa17.15■□□□□ 0.34
COL7A1-203ENST00000459756 C8orf33Q9H7E9 229 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-203ENST00000459756 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 PSMA7O14818 248 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 SLC16A3O15427 465 aaKnown RBP17.14■□□□□ 0.33
COL7A1-203ENST00000459756 USP17L7P0C7H9 530 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 PPP1R2P41236 205 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 NBL1P41271 181 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 RPS9P46781 194 aaKnown RBP17.14■□□□□ 0.33
COL7A1-203ENST00000459756 PPP3CCP48454 512 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 PDE6CP51160 858 aa17.14■□□□□ 0.33
COL7A1-203ENST00000459756 KPNA1P52294 538 aaPredicted RBP17.14■□□□□ 0.33
COL7A1-203ENST00000459756 KRT39Q6A163 491 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms