RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 TAF4BQ92750 862 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 MYLPFQ96A32 169 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 LRRC3BQ96PB8 259 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 CRTAC1Q9NQ79 661 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
COL16A1-205ENST00000458715 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
COL16A1-205ENST00000458715 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 GOLGA6L4A6NEF3 574 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 A8MXQ7 604 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 PTPN1P18031 435 aaKnown RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 BDNFP23560 247 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 GPR15P49685 360 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 CCR3P51677 355 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 PSMC1P62191 440 aaKnown RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 MTAPQ13126 283 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 NCOA4Q13772 614 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 KCNB1Q14721 858 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 NFIL3Q16649 462 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 ZNF667Q5HYK9 610 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 DENND5BQ6ZUT9 1274 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 USP13Q92995 863 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 TNIP3Q96KP6 325 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 C8orf48Q96LL4 319 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 ELOVL4Q9GZR5 314 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
COL16A1-205ENST00000458715 XYLT2Q9H1B5 865 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 GKN1Q9NS71 199 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 ZSCAN32Q9NX65 697 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 R4GN57 208 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
COL16A1-205ENST00000458715 NCANO14594 1321 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 LRRIQ3A6PVS8 624 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 CLSTN1O94985 981 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 ZNF202O95125 648 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 C4BPAP04003 597 aaKnown RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 CHRNB1P11230 501 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 CTHP32929 405 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 NOP14P78316 857 aaKnown RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 ENPEPQ07075 957 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 DPYDQ12882 1025 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 ZNF699Q32M78 642 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 TDRD10Q5VZ19 366 aaKnown RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 ADSSL1Q8N142 457 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 GUF1Q8N442 669 aaKnown RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-205ENST00000458715 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.32
COL16A1-205ENST00000458715 HCRTO43612 131 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 CKMP06732 381 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 CXCL12P48061 93 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 CASP4P49662 377 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 MDH1BQ5I0G3 518 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 INTS8Q75QN2 995 aaKnown RBP17.07■□□□□ 0.32
COL16A1-205ENST00000458715 SPEM1Q8N4L4 309 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 KIAA1958Q8N8K9 716 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 ZBTB44Q8NCP5 570 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 NELL1Q92832 810 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 ZFYVE19Q96K21 471 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
COL16A1-205ENST00000458715 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
COL16A1-205ENST00000458715 MIA3Q5JRA6 1907 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 EP300Q09472 2414 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-205ENST00000458715 KRT13P13646 458 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 HDCP19113 662 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 VAMP7P51809 220 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 NR1H3Q13133 447 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 RUNX3Q13761 415 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 ZACNQ401N2 412 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 SLITRK1Q96PX8 696 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 TTLL2Q9BWV7 592 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 RMND1Q9NWS8 449 aa17.06■□□□□ 0.32
COL16A1-205ENST00000458715 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
COL16A1-205ENST00000458715 GVINP1Q7Z2Y8 2422 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 RTN3O95197 1032 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-205ENST00000458715 TCF3P15923 654 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 NR2F2P24468 414 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 PSMC2P35998 433 aaKnown RBP17.05■□□□□ 0.32
COL16A1-205ENST00000458715 GRSF1Q12849 480 aaKnown RBP eCLIP17.05■□□□□ 0.32
COL16A1-205ENST00000458715 ADAM9Q13443 819 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 MTF1Q14872 753 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 SV2AQ7L0J3 742 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 CPA6Q8N4T0 437 aa17.05■□□□□ 0.32
COL16A1-205ENST00000458715 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms