RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 BMP8AQ7Z5Y6 402 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 ARID3BQ8IVW6 561 aaPredicted RBP19.89■□□□□ 0.77
USP39-209ENST00000458268 MAB21L3Q8N8X9 362 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 MRPS31Q92665 395 aaKnown RBP19.89■□□□□ 0.77
USP39-209ENST00000458268 SEMA4DQ92854 862 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 JAKMIP2Q96AA8 810 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 DUSP9Q99956 384 aaKnown RBP19.89■□□□□ 0.77
USP39-209ENST00000458268 GPR88Q9GZN0 384 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 NUP62CLQ9H1M0 184 aa19.89■□□□□ 0.77
USP39-209ENST00000458268 HEPACAM2A8MVW5 462 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TRIM66O15016 1216 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 ABL1P00519 1130 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TRIM21P19474 475 aaKnown RBP19.88■□□□□ 0.77
USP39-209ENST00000458268 GTF2H1P32780 548 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 MAGEA11P43364 429 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 CACNA2D1P54289 1103 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 ZNF394Q53GI3 561 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 IER5LQ5T953 404 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TXNDC8Q6A555 127 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TTI2Q6NXR4 508 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 VSTM1Q6UX27 236 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 FAM35AQ86V20 835 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TRMT61BQ9BVS5 477 aaKnown RBP19.88■□□□□ 0.77
USP39-209ENST00000458268 ELOVL4Q9GZR5 314 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TASP1Q9H6P5 420 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 TBC1D17Q9HA65 648 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 KRT82Q9NSB4 513 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 RAB20Q9NX57 234 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 UXTQ9UBK9 157 aaPredicted RBP19.88■□□□□ 0.77
USP39-209ENST00000458268 WNT16Q9UBV4 365 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 ZDBF2Q9HCK1 2354 aa19.88■□□□□ 0.77
USP39-209ENST00000458268 NCANO14594 1321 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 PRAMEF12O95522 483 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 FAM163BP0C2L3 166 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 AVPR2P30518 371 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 AVPR1AP37288 418 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 DENND5BQ6ZUT9 1274 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 ZC3H3Q8IXZ2 948 aaKnown RBP19.87■□□□□ 0.77
USP39-209ENST00000458268 TRIML1Q8N9V2 468 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 TTC8Q8TAM2 541 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 RSPRY1Q96DX4 576 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 CEP63Q96MT8 703 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 SRRTQ9BXP5 876 aaKnown RBP19.87■□□□□ 0.77
USP39-209ENST00000458268 METTL14Q9HCE5 456 aaKnown RBP19.87■□□□□ 0.77
USP39-209ENST00000458268 SLC2A4RGQ9NR83 387 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 LMBRD1Q9NUN5 540 aa19.87■□□□□ 0.77
USP39-209ENST00000458268 GOLGA6L22H0YM25 854 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 ZNF263O14978 683 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 AP1G2O75843 785 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 NOL4O94818 638 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 F11P03951 625 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 PSMC3P17980 439 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 USP46P62068 366 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 PFKPQ01813 784 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 ENPEPQ07075 957 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
USP39-209ENST00000458268 CWF19L1Q69YN2 538 aaKnown RBP19.86■□□□□ 0.77
USP39-209ENST00000458268 ASTLQ6HA08 431 aaPredicted RBP19.86■□□□□ 0.77
USP39-209ENST00000458268 FILIP1Q7Z7B0 1213 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 C12orf29Q8N999 325 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 SLC2A14Q8TDB8 520 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 TATDN2Q93075 761 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 SLC35C1Q96A29 364 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 TWNKQ96RR1 684 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 ARID3AQ99856 593 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 SLC46A2Q9BY10 475 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 BCO2Q9BYV7 579 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 HEBP1Q9NRV9 189 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 TMEM30AQ9NV96 361 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 MYO16Q9Y6X6 1858 aa19.86■□□□□ 0.77
USP39-209ENST00000458268 ZNF318Q5VUA4 2279 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 MIA3Q5JRA6 1907 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 ANAPC1Q9H1A4 1944 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 CD72P21854 359 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 UBXN2BQ14CS0 331 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 MLF2Q15773 248 aaPredicted RBP19.85■□□□□ 0.77
USP39-209ENST00000458268 SLC44A4Q53GD3 710 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 TPRG1Q6ZUI0 275 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 FRMD5Q7Z6J6 570 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 TMEM150AQ86TG1 271 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 TMEM105Q8N8V8 129 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 ZFYVE19Q96K21 471 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 KCNK16Q96T55 309 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 NT5C1AQ9BXI3 368 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 FOXQ1Q9C009 403 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 CYP3A43Q9HB55 503 aa19.85■□□□□ 0.77
USP39-209ENST00000458268 KIF26AQ9ULI4 1882 aaPredicted RBP19.84■□□□□ 0.77
USP39-209ENST00000458268 PI15O43692 258 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 TADA3O75528 432 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 CKMP06732 381 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 NPR3P17342 541 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 FMO5P49326 533 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 UNC93AQ86WB7 457 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 MFSD6LQ8IWD5 586 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 CMTM8Q8IZV2 173 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 CSGALNACT1Q8TDX6 532 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 DEPDC1BQ8WUY9 529 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 TRMT2BQ96GJ1 504 aaKnown RBP19.84■□□□□ 0.77
USP39-209ENST00000458268 SMARCD1Q96GM5 515 aa19.84■□□□□ 0.77
USP39-209ENST00000458268 SPATA17Q96L03 361 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms