RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 INTS4Q96HW7 963 aaKnown RBP23.06■■□□□ 1.28
CPNE1-220ENST00000458038 HPDLQ96IR7 371 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 ZC3H10Q96K80 434 aaKnown RBP23.06■■□□□ 1.28
CPNE1-220ENST00000458038 SPATA17Q96L03 361 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 CNTNAP3BQ96NU0 1288 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 CNTNAP3Q9BZ76 1288 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 TRPC7Q9HCX4 862 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 MAGEC2Q9UBF1 373 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-220ENST00000458038 CDH9Q9ULB4 789 aa23.06■■□□□ 1.28
CPNE1-220ENST00000458038 PRPF6O94906 941 aaKnown RBP23.05■■□□□ 1.28
CPNE1-220ENST00000458038 EPN2O95208 641 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 EGFP01133 1207 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 USP4Q13107 963 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 IL31Q6EBC2 164 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 SYT13Q7L8C5 426 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 OSTM1Q86WC4 334 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 SCN4BQ8IWT1 228 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 KIAA1958Q8N8K9 716 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 C12orf50Q8NA57 414 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-220ENST00000458038 ACDQ96AP0 544 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 PANK2Q9BZ23 570 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 ARRDC1-AS1Q9H2J1 176 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 EML5Q05BV3 1969 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 LAMA1P25391 3075 aa23.05■■□□□ 1.28
CPNE1-220ENST00000458038 AXIN1O15169 862 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 FAM163BP0C2L3 166 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 HDCP19113 662 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 AMPD3Q01432 767 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 KCNB1Q14721 858 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 AASDHQ4L235 1098 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-220ENST00000458038 STKLD1Q8NE28 680 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 RIN3Q8TB24 985 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 CD101Q93033 1021 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 CYP2S1Q96SQ9 504 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 SYT15Q9BQS2 421 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 TNMDQ9H2S6 317 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 CUEDC2Q9H467 287 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 FBRSL1Q9HCM7 1045 aaKnown RBP23.04■■□□□ 1.28
CPNE1-220ENST00000458038 GCNT4Q9P109 453 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 EBF1Q9UH73 591 aa23.04■■□□□ 1.28
CPNE1-220ENST00000458038 KMT2BQ9UMN6 2715 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-220ENST00000458038 GDF9O60383 454 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 PPP3CCP48454 512 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 PXNP49023 591 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-220ENST00000458038 EML3Q32P44 896 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 FAM173BQ6P4H8 233 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 KBTBD6Q86V97 674 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 WDR49Q8IV35 697 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 USP28Q96RU2 1077 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 SLC22A12Q96S37 553 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 FGFBP2Q9BYJ0 223 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 ARHGAP26Q9UNA1 814 aa23.03■■□□□ 1.28
CPNE1-220ENST00000458038 HELZP42694 1942 aaKnown RBP23.03■■□□□ 1.28
CPNE1-220ENST00000458038 A0A087X0B3 334 aa23.02■■□□□ 1.28
CPNE1-220ENST00000458038 EIF3DO15371 548 aaKnown RBP eCLIP23.02■■□□□ 1.28
CPNE1-220ENST00000458038 WARSP23381 471 aaKnown RBP23.02■■□□□ 1.28
CPNE1-220ENST00000458038 ARL14EPQ8N8R7 260 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-220ENST00000458038 SH3RF2Q8TEC5 729 aa23.02■■□□□ 1.28
CPNE1-220ENST00000458038 TRPM5Q9NZQ8 1165 aa23.02■■□□□ 1.28
CPNE1-220ENST00000458038 MAP1BP46821 2468 aaKnown RBP23.02■■□□□ 1.28
CPNE1-220ENST00000458038 PTPRDP23468 1912 aa23.02■■□□□ 1.28
CPNE1-220ENST00000458038 TRIM66O15016 1216 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 NFATC1O95644 943 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 APBB3O95704 486 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 ANXA13P27216 316 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 HOXC13P31276 330 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 GRIK1P39086 918 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 NASPP49321 788 aaPredicted RBP23.01■■□□□ 1.27
CPNE1-220ENST00000458038 SNRPFP62306 86 aaKnown RBP23.01■■□□□ 1.27
CPNE1-220ENST00000458038 ELF2Q15723 593 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 PLA2G2CQ5R387 149 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 DENND5BQ6ZUT9 1274 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 PDILTQ8N807 584 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 OR5B17Q8NGF7 314 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 RPLP0P6Q8NHW5 317 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 KBTBD7Q8WVZ9 684 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 KBTBD4Q9NVX7 518 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 HSPBP1Q9NZL4 362 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 WNT6Q9Y6F9 365 aa23.01■■□□□ 1.27
CPNE1-220ENST00000458038 C2orf78A6NCI8 922 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 RHOBTB1O94844 696 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 BDNFP23560 247 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 LMO2P25791 158 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 PLK5Q496M5 336 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 SCARA3Q6AZY7 606 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 CNNM4Q6P4Q7 775 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 C11orf74Q86VG3 221 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 CBWD2Q8IUF1 395 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 MYCBPAPQ8TBZ2 947 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 MMS19Q96T76 1030 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 TTLL2Q9BWV7 592 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 VPS45Q9NRW7 570 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 MTMR6Q9Y217 621 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 MYO16Q9Y6X6 1858 aa23■■□□□ 1.27
CPNE1-220ENST00000458038 ATP2C2O75185 946 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 TACC1O75410 805 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 NOP14P78316 857 aaKnown RBP22.99■■□□□ 1.27
CPNE1-220ENST00000458038 DMC1Q14565 340 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 STK38Q15208 465 aa22.99■■□□□ 1.27
CPNE1-220ENST00000458038 SF3A2Q15428 464 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms