RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GNA14O95837 355 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 PSMC3P17980 439 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 CD58P19256 250 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 ASPAP45381 313 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 CETN1Q12798 172 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 GRM2Q14416 872 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 TPD52L1Q16890 204 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 STXBP5Q5T5C0 1151 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 DENND5BQ6ZUT9 1274 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 MAB21L3Q8N8X9 362 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 DEPDC1BQ8WUY9 529 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 SPATA17Q96L03 361 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 CEP295NLQ96MC4 621 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 IL21Q9HBE4 155 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 RAPGEFL1Q9UHV5 662 aa19.23■□□□□ 0.67
PDLIM2-215ENST00000456545 HEPACAM2A8MVW5 462 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 F8VP50 259 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 ZNF263O14978 683 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 F11P03951 625 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 CCDC192P0DO97 292 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 DDX6P26196 483 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 AVPR2P30518 371 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 GDI1P31150 447 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 AVPR1AP37288 418 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 MCCD1P59942 119 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 ORC1Q13415 861 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 FOXR2Q6PJQ5 311 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 TTC39CQ8N584 583 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 SEMA4DQ92854 862 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 C8orf48Q96LL4 319 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 NT5C1AQ9BXI3 368 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 BCO2Q9BYV7 579 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 TRPV4Q9HBA0 871 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 APOBEC3GQ9HC16 384 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 ARHGEF3Q9NR81 526 aa19.22■□□□□ 0.67
PDLIM2-215ENST00000456545 FCARP24071 287 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 IFRD2Q12894 506 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 CBWD6Q4V339 395 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 SLC44A4Q53GD3 710 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 CBWD3Q5JTY5 395 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 CBWD5Q5RIA9 395 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 ASTLQ6HA08 431 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 VITQ6UXI7 678 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 MFSD6LQ8IWD5 586 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 CRYBG2Q8N1P7 616 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 IRF7Q92985 503 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 SMARCD1Q96GM5 515 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 FAXDC2Q96IV6 333 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 MYRFLQ96LU7 910 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 SLC46A2Q9BY10 475 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 RWDD2AQ9UIY3 292 aa19.21■□□□□ 0.67
PDLIM2-215ENST00000456545 KRBA1A5PL33 1030 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 LRRN2O75325 713 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 AP1G2O75843 785 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 ABL1P00519 1130 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 FMO5P49326 533 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 CLCN5P51795 746 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 TXNDC8Q6A555 127 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 FAM35AQ86V20 835 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 CMTM8Q8IZV2 173 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 NUP93Q8N1F7 819 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 CSGALNACT1Q8TDX6 532 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 TATDN2Q93075 761 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 SLC35C1Q96A29 364 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 HEXIM2Q96MH2 286 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 FAM49BQ9NUQ9 324 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 THG1LQ9NWX6 298 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 DACH1Q9UI36 760 aa19.2■□□□□ 0.66
PDLIM2-215ENST00000456545 SOBPA7XYQ1 873 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 CCDC130P13994 396 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 ADORA2BP29275 332 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 VCPP55072 806 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 YWHAEP62258 255 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 LRMPQ12912 555 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 MLF2Q15773 248 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 ZNF394Q53GI3 561 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 MON1AQ86VX9 555 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 CELF5Q8N6W0 485 aaKnown RBP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 C12orf29Q8N999 325 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 SLC2A14Q8TDB8 520 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 CYFIP2Q96F07 1278 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 PRRX2Q99811 253 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 TBC1D17Q9HA65 648 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 DMAP1Q9NPF5 467 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 HMGXB4Q9UGU5 601 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 COQ4Q9Y3A0 265 aa19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.19■□□□□ 0.66
PDLIM2-215ENST00000456545 TRAV19A0A0A6YYK7 116 aa19.18■□□□□ 0.66
PDLIM2-215ENST00000456545 RTN3O95197 1032 aaPredicted RBP19.18■□□□□ 0.66
PDLIM2-215ENST00000456545 PPP3CCP48454 512 aa19.18■□□□□ 0.66
PDLIM2-215ENST00000456545 PRKCQQ04759 706 aa19.18■□□□□ 0.66
PDLIM2-215ENST00000456545 INCA1Q0VD86 236 aa19.18■□□□□ 0.66
PDLIM2-215ENST00000456545 TMEM150AQ86TG1 271 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms