RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 OBP2AQ9NY56 170 aa13.85□□□□□ -0.19
TREX1-203ENST00000456089 MYOFQ9NZM1 2061 aa13.85□□□□□ -0.19
TREX1-203ENST00000456089 CACNA1AO00555 2505 aa13.85□□□□□ -0.19
TREX1-203ENST00000456089 TGFB1I1O43294 461 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 KLRC4O43908 158 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 CLSTN1O94985 981 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 LMO2P25791 158 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 AVPR1AP37288 418 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 MYL7Q01449 175 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 NFE2Q16621 373 aaPredicted RBP13.84□□□□□ -0.19
TREX1-203ENST00000456089 ITPRIPL2Q3MIP1 535 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 ERMP1Q7Z2K6 904 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 DGLUCYQ7Z3D6 616 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 SPATA2LQ8IUW3 424 aaPredicted RBP13.84□□□□□ -0.19
TREX1-203ENST00000456089 SPEM1Q8N4L4 309 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 CCDC127Q96BQ5 260 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 CHFRQ96EP1 664 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 CYP2S1Q96SQ9 504 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 ACBD6Q9BR61 282 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 GDAP2Q9NXN4 497 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
TREX1-203ENST00000456089 USP18Q9UMW8 372 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
TREX1-203ENST00000456089 K7ESF4 209 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 HRO43593 1189 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 PDGFRBP09619 1106 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 CSH1P0DML2 217 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 CSH2P0DML3 217 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 WEE1P30291 646 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 PXNP49023 591 aaPredicted RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 NRLP54845 237 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 MLLT6P55198 1093 aaPredicted RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 SPEM2Q0P670 501 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 CCINQ13939 588 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 PPP2R5DQ14738 602 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 WDR49Q8IV35 697 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 TMEM86AQ8N2M4 240 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 KIAA0895Q8NCT3 520 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 KBTBD7Q8WVZ9 684 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 HPDLQ96IR7 371 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 FAM126AQ9BYI3 521 aaPredicted RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 CRTAC1Q9NQ79 661 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 TDP1Q9NUW8 608 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 THG1LQ9NWX6 298 aaKnown RBP13.83□□□□□ -0.2
TREX1-203ENST00000456089 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
TREX1-203ENST00000456089 C2orf78A6NCI8 922 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 GABRDO14764 452 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 PHACTR2O75167 634 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 NOL4O94818 638 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 SMC2O95347 1197 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 TGM1P22735 817 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 RPL10AP62906 217 aaKnown RBP13.82□□□□□ -0.2
TREX1-203ENST00000456089 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 FOXK2Q01167 660 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 CYP24A1Q07973 514 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 DPYDQ12882 1025 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 TRPC3Q13507 836 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 RUNX3Q13761 415 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 SIM2Q14190 667 aaPredicted RBP13.82□□□□□ -0.2
TREX1-203ENST00000456089 PUM1Q14671 1186 aaKnown RBP eCLIP13.82□□□□□ -0.2
TREX1-203ENST00000456089 PSMD6Q15008 389 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 DGKKQ5KSL6 1271 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 MON1AQ86VX9 555 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 C12orf56Q8IXR9 622 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 TOP6BLQ8N6T0 577 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 ELMO3Q96BJ8 720 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 MRPL45Q9BRJ2 306 aaKnown RBP13.82□□□□□ -0.2
TREX1-203ENST00000456089 IER2Q9BTL4 223 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
TREX1-203ENST00000456089 GMEB2Q9UKD1 530 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 RAB23Q9ULC3 237 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 FRMD4BQ9Y2L6 1034 aa13.82□□□□□ -0.2
TREX1-203ENST00000456089 PDXKO00764 312 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 CST3P01034 146 aaPredicted RBP13.81□□□□□ -0.2
TREX1-203ENST00000456089 EGFP01133 1207 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 BDNFP23560 247 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 DDX6P26196 483 aaKnown RBP eCLIP13.81□□□□□ -0.2
TREX1-203ENST00000456089 PCSK1P29120 753 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 LHX1P48742 406 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 USP46P62068 366 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 CYP27A1Q02318 531 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 KCNB1Q14721 858 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
TREX1-203ENST00000456089 ARL14EPQ8N8R7 260 aaPredicted RBP13.81□□□□□ -0.2
TREX1-203ENST00000456089 SECISBP2LQ93073 1101 aaKnown RBP13.81□□□□□ -0.2
TREX1-203ENST00000456089 MMS19Q96T76 1030 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms