RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZFP14Q9HCL3 533 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 COQ4Q9Y3A0 265 aa18.48■□□□□ 0.55
USP39-208ENST00000455732 PMM2O15305 246 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 GALR2O43603 387 aaPredicted RBP18.47■□□□□ 0.55
USP39-208ENST00000455732 NOL4O94818 638 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 GABRR2P28476 465 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 CDC25CP30307 473 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 GPR15P49685 360 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
USP39-208ENST00000455732 STARD6P59095 220 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 CBWD6Q4V339 395 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 CBWD3Q5JTY5 395 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 CBWD5Q5RIA9 395 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 TCERG1LQ5VWI1 586 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 MLKLQ8NB16 471 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 ZSCAN18Q8TBC5 510 aaPredicted RBP18.47■□□□□ 0.55
USP39-208ENST00000455732 SEMA4DQ92854 862 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 TRMT2BQ96GJ1 504 aaKnown RBP18.47■□□□□ 0.55
USP39-208ENST00000455732 SPATA17Q96L03 361 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 MYRFLQ96LU7 910 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 ELOVL4Q9GZR5 314 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 FAM124BQ9H5Z6 455 aaPredicted RBP18.47■□□□□ 0.55
USP39-208ENST00000455732 RAB20Q9NX57 234 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 RWDD2AQ9UIY3 292 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 CACNA1IQ9P0X4 2223 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 NCANO14594 1321 aa18.47■□□□□ 0.55
USP39-208ENST00000455732 KIF26AQ9ULI4 1882 aaPredicted RBP18.46■□□□□ 0.55
USP39-208ENST00000455732 USP34Q70CQ2 3546 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 TRIM66O15016 1216 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 GNA14O95837 355 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 BDNFP23560 247 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 PFKPQ01813 784 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 TAF12Q16514 161 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 DDR2Q16832 855 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 STXBP5Q5T5C0 1151 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 VITQ6UXI7 678 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 GCNAQ96QF7 691 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 PHOX2BQ99453 314 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 DDX23Q9BUQ8 820 aaKnown RBP18.46■□□□□ 0.55
USP39-208ENST00000455732 IRF2BPLQ9H1B7 796 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 ATXN3LQ9H3M9 355 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
USP39-208ENST00000455732 ZMYM5Q9UJ78 669 aa18.46■□□□□ 0.55
USP39-208ENST00000455732 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
USP39-208ENST00000455732 WEE1P30291 646 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 VIPR2P41587 438 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 STX17P56962 302 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 MLF2Q15773 248 aaPredicted RBP18.45■□□□□ 0.54
USP39-208ENST00000455732 CCDC40Q4G0X9 1142 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 SLC44A4Q53GD3 710 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 ARHGAP15Q53QZ3 475 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 SDHAF4Q5VUM1 108 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 CRYBG2Q8N1P7 616 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 C8orf48Q96LL4 319 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 B3GNT5Q9BYG0 378 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 SLITRK6Q9H5Y7 841 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 HMGXB4Q9UGU5 601 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 ATP8B3O60423 1300 aa18.45■□□□□ 0.54
USP39-208ENST00000455732 SLC38A8A6NNN8 435 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 SOBPA7XYQ1 873 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 LRRN2O75325 713 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 F11P03951 625 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 PSMC3P17980 439 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 DDX6P26196 483 aaKnown RBP eCLIP18.44■□□□□ 0.545e-6■■■■■ 34.8
USP39-208ENST00000455732 NDST1P52848 882 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 NLRP12P59046 1061 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 PRKCQQ04759 706 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 GRM2Q14416 872 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 WDR44Q5JSH3 913 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 TMEM150AQ86TG1 271 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 TRIM59Q8IWR1 403 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 SCN4BQ8IWT1 228 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 CCDC105Q8IYK2 499 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 E2F7Q96AV8 911 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 RSPRY1Q96DX4 576 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 SHDQ96IW2 340 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 TRMT61BQ9BVS5 477 aaKnown RBP18.44■□□□□ 0.54
USP39-208ENST00000455732 ZNF518BQ9C0D4 1074 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 TASP1Q9H6P5 420 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP39-208ENST00000455732 MYH10P35580 1976 aa18.44■□□□□ 0.54
USP39-208ENST00000455732 HEPACAM2A8MVW5 462 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 STK25O00506 426 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 P4HA2O15460 535 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 CILPO75339 1184 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 TRIM21P19474 475 aaKnown RBP18.43■□□□□ 0.54
USP39-208ENST00000455732 ANXA13P27216 316 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 GRIK1P39086 918 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 FMO5P49326 533 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 FAM35AQ86V20 835 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 ARID3BQ8IVW6 561 aaPredicted RBP18.43■□□□□ 0.54
USP39-208ENST00000455732 MFSD6LQ8IWD5 586 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 STKLD1Q8NE28 680 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 DEPDC1BQ8WUY9 529 aa18.43■□□□□ 0.54
USP39-208ENST00000455732 DNASE1L2Q92874 299 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms