RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ACTN3Q08043 901 aaPredicted RBP15.83■□□□□ 0.12
LDLR-202ENST00000455727 NR1H3Q13133 447 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 STILQ15468 1287 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 LACTB2Q53H82 288 aaPredicted RBP15.83■□□□□ 0.12
LDLR-202ENST00000455727 MARCH8Q5T0T0 291 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 ANKS4BQ8N8V4 417 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 ACTL9Q8TC94 416 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 NSRP1Q9H0G5 558 aaKnown RBP15.83■□□□□ 0.12
LDLR-202ENST00000455727 PPCSQ9HAB8 311 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 DERAQ9Y315 318 aa15.83■□□□□ 0.12
LDLR-202ENST00000455727 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.12
LDLR-202ENST00000455727 TRIP11Q15643 1979 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 RALGAPA2Q2PPJ7 1873 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 MIPP30301 263 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 ZNF143P52747 638 aaPredicted RBP15.82■□□□□ 0.12
LDLR-202ENST00000455727 OTUD4Q01804 1114 aaKnown RBP15.82■□□□□ 0.12
LDLR-202ENST00000455727 ORC1Q13415 861 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 GRIK4Q16099 956 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 SMTNL2Q2TAL5 461 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 MAP1SQ66K74 1059 aaPredicted RBP15.82■□□□□ 0.12
LDLR-202ENST00000455727 PACS2Q86VP3 889 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 CYP4X1Q8N118 509 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 EMC1Q8N766 993 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 MS4A4AQ96JQ5 239 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 OSBPL7Q9BZF2 842 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 KDM4CQ9H3R0 1056 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 PLEKHA5Q9HAU0 1116 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 GOLGA6L7A0A1B0GV03 622 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 SMAPO00193 183 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 ENDOD1O94919 500 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 TRUB2O95900 331 aaKnown RBP15.82■□□□□ 0.12
LDLR-202ENST00000455727 BRAFP15056 766 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 CREB1P16220 341 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.123e-9■□□□□ 8.2
LDLR-202ENST00000455727 NDST1P52848 882 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 RASA2Q15283 850 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 DCAF4L1Q3SXM0 396 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 DUSP28Q4G0W2 176 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 KCNT1Q5JUK3 1230 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 CENPUQ71F23 418 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 TMEM130Q8N3G9 435 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 KCTD6Q8NC69 237 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 MAML1Q92585 1016 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 PRCCQ92733 491 aaPredicted RBP15.82■□□□□ 0.12
LDLR-202ENST00000455727 HAUS1Q96CS2 278 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 PPP1R16BQ96T49 567 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 CNPY3Q9BT09 278 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 NT5C1AQ9BXI3 368 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 USP18Q9UMW8 372 aa15.82■□□□□ 0.12
LDLR-202ENST00000455727 APOC4-APOC2K7ER74 178 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 APOC2P02655 101 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 RDXP35241 583 aaKnown RBP15.81■□□□□ 0.12
LDLR-202ENST00000455727 CDC42EP1Q00587 391 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 CYP4F22Q6NT55 531 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 APBB1IPQ7Z5R6 666 aaPredicted RBP15.81■□□□□ 0.12
LDLR-202ENST00000455727 CCT6BQ92526 530 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 RSAD1Q9HA92 442 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 UBN1Q9NPG3 1134 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 CAPN7Q9Y6W3 813 aa15.81■□□□□ 0.12
LDLR-202ENST00000455727 VIMP08670 466 aaKnown RBP15.8■□□□□ 0.12
LDLR-202ENST00000455727 GHRP10912 638 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 IFNAR2P48551 515 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 GTF2A2P52657 109 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 FAM102AQ5T9C2 384 aaPredicted RBP15.8■□□□□ 0.12
LDLR-202ENST00000455727 CHADLQ6NUI6 762 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 ARHGEF18Q6ZSZ5 1173 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 TAX1BP1Q86VP1 789 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 PPIL6Q8IXY8 311 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 DYDC1Q8WWB3 177 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 CKAP2Q8WWK9 683 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 KCNK9Q9NPC2 374 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.8■□□□□ 0.12
LDLR-202ENST00000455727 EXOC1LA0A1B0GW35 172 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 RRN3P2A6NIE6 340 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 C2CD4BA6NLJ0 364 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 IFNB1P01574 187 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 MMP3P08254 477 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 GPD1P21695 349 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 ANKRD23Q86SG2 305 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 CNPY4Q8N129 248 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 UBA3Q8TBC4 463 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 KIF12Q96FN5 646 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
LDLR-202ENST00000455727 SAE1Q9UBE0 346 aaPredicted RBP15.8■□□□□ 0.12
LDLR-202ENST00000455727 CCT8L1PA6NM43 557 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 SMPD1P17405 629 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 GCAP28676 217 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 SLC18A1P54219 525 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 DYNLT1P63172 113 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 MPP2Q14168 576 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 GRB14Q14449 540 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 DGKDQ16760 1214 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 ANKRD20A8PQ5CZ79 823 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 IQSEC1Q6DN90 963 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 PPP1R21Q6ZMI0 780 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 CCDC13Q8IYE1 715 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 RSAD2Q8WXG1 361 aa15.79■□□□□ 0.12
LDLR-202ENST00000455727 MAML3Q96JK9 1138 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms